RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 IVLP07476 585 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 GLI1P08151 1106 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 SUPT20HL2P0C7V6 817 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 GOLGA6DP0CG33 693 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 HSPA6P17066 643 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CAPN2P17655 700 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ACTN2P35609 894 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 USP8P40818 1118 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CARSP49589 748 aaKnown RBP10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ACTR2P61160 394 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 MRPS25P82663 173 aaKnown RBP10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CYP24A1Q07973 514 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 TMEM132BQ14DG7 1078 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 SUPT20HL1Q3ZLR7 823 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 XKR3Q5GH77 459 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CATSPERGQ6ZRH7 1159 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ENOSF1Q7L5Y1 443 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 DNAAF5Q86Y56 855 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CBWD2Q8IUF1 395 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 FAM71AQ8IYT1 594 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 RPUSD2Q8IZ73 545 aaKnown RBP10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 GPD1LQ8N335 351 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CHST13Q8NET6 341 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CCDC26Q8TAB7 109 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 PLEKHO2Q8TD55 490 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 MORC4Q8TE76 937 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 SAAL1Q96ER3 474 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 BICD1Q96G01 975 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 MFSD14AQ96MC6 490 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 FBXL18Q96ME1 805 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 SH3GL2Q99962 352 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 SH2D3AQ9BRG2 576 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 POLR3FQ9H1D9 316 aaPredicted RBP10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ISCUQ9H1K1 167 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CARD9Q9H257 536 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 KIAA1586Q9HCI6 787 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 GOLGA6AQ9NYA3 693 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CYP39A1Q9NYL5 469 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 GGA3Q9NZ52 723 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CTTNBP2NLQ9P2B4 639 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 NFU1Q9UMS0 254 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 SYNGAP1Q96PV0 1343 aa10.3□□□□□ -0.76
RAB3GAP1-205ENST00000489858 PAPPA2Q9BXP8 1791 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 SPATA31C2B4DYI2 1134 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 AGPSO00116 658 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 HNRNPDLO14979 420 aaKnown RBP10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 DDX3YO15523 660 aaKnown RBP10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ZNF862O60290 1169 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ZC3H11AO75152 810 aaKnown RBP eCLIP10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 RPS6KA5O75582 802 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 MTA2O94776 668 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 STBD1O95210 358 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 GZMAP12544 262 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CNGA1P29973 690 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 PDE6CP51160 858 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 GPC3P51654 580 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 RNASE9P60153 205 aaKnown RBP10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ERVK-9P63128 1117 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 GPC5P78333 572 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 GUCA2AQ02747 115 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 MAP2K1Q02750 393 aaPredicted RBP10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 HLTFQ14527 1009 aaKnown RBP eCLIP10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 PTPROQ16827 1216 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 SWSAP1Q6NVH7 229 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 MAATS1Q7Z4T9 603 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 PPM1KQ8N3J5 372 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 UBL4BQ8N7F7 174 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 TSEN2Q8NCE0 465 aaKnown RBP10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 PARD3BQ8TEW8 1205 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 BSNDQ8WZ55 320 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 POMGNT1Q8WZA1 660 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 SHC3Q92529 594 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CCDC127Q96BQ5 260 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 KLRG1Q96E93 195 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 NTPCRQ9BSD7 190 aaKnown RBP10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 KIFC3Q9BVG8 833 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 THAP2Q9H0W7 228 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 OSGEPQ9NPF4 335 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 A1CFQ9NQ94 594 aaKnown RBP10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 HOXC10Q9NYD6 342 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 NOCTQ9UK39 431 aaKnown RBP10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 COQ4Q9Y3A0 265 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 DOCK5Q9H7D0 1870 aa10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 DICER1Q9UPY3 1922 aaKnown RBP10.29□□□□□ -0.76
RAB3GAP1-205ENST00000489858 LRRC37A2A6NM11 1700 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ESYT3A0FGR9 886 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ZSCAN5CA6NGD5 496 aaPredicted RBP10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 TERTO14746 1132 aaKnown RBP10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 GGPS1O95749 300 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ADSSP30520 456 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ICAM3P32942 547 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 HSPA9P38646 679 aaKnown RBP10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 LIG4P49917 911 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 POLGP54098 1239 aaPredicted RBP10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CDR2Q01850 454 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 SP4Q02446 784 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 EMC2Q15006 297 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 STXBP2Q15833 593 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ZSCAN26Q16670 478 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 MTERF2Q49AM1 385 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms