RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 LACTBL1A8MY62 500 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 PDXKO00764 312 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 HOXA2O43364 376 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 EXTL3O43909 919 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 ZC3H11AO75152 810 aaKnown RBP eCLIP9.02□□□□□ -0.97
SF1-218ENST00000489544 CSPG5O95196 566 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 NR3C1P04150 777 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 CLTAP09496 248 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 CASP4P49662 377 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 YARSP54577 528 aaKnown RBP9.02□□□□□ -0.97
SF1-218ENST00000489544 RNASELQ05823 741 aaKnown RBP9.02□□□□□ -0.97
SF1-218ENST00000489544 SOX4Q06945 474 aaPredicted RBP9.02□□□□□ -0.97
SF1-218ENST00000489544 NAB2Q15742 525 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 DPCR1Q3MIW9 517 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 ZCWPW2Q504Y3 356 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 CCDC183Q5T5S1 534 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 LMBRD2Q68DH5 695 aaPredicted RBP9.02□□□□□ -0.97
SF1-218ENST00000489544 ANKRD40Q6AI12 368 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 ALKAL1Q6UXT8 129 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 RBM43Q6ZSC3 357 aaKnown RBP9.02□□□□□ -0.97
SF1-218ENST00000489544 FAM43BQ6ZT52 329 aaPredicted RBP9.02□□□□□ -0.97
SF1-218ENST00000489544 HS2ST1Q7LGA3 356 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 APBB1IPQ7Z5R6 666 aaPredicted RBP9.02□□□□□ -0.97
SF1-218ENST00000489544 TMEM173Q86WV6 379 aaPredicted RBP9.02□□□□□ -0.97
SF1-218ENST00000489544 LRRC43Q8N309 656 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 GPD1LQ8N335 351 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 URGCPQ8TCY9 931 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 ARNTL2Q8WYA1 636 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 MED15Q96RN5 788 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 RPS6KC1Q96S38 1066 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 PAAF1Q9BRP4 392 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 ZNF576Q9H609 170 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 RPF1Q9H9Y2 349 aaKnown RBP9.02□□□□□ -0.97
SF1-218ENST00000489544 SLC28A3Q9HAS3 691 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 UBN1Q9NPG3 1134 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 TUBGCP4Q9UGJ1 667 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 CTNND2Q9UQB3 1225 aa9.02□□□□□ -0.97
SF1-218ENST00000489544 PRG3Q9Y2Y8 225 aaPredicted RBP9.02□□□□□ -0.97
SF1-218ENST00000489544 FNDC1Q4ZHG4 1894 aaPredicted RBP9.02□□□□□ -0.97
SF1-218ENST00000489544 COL6A3P12111 3177 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 TTC26A0AVF1 554 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 CASTOR2A6NHX0 329 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 INPPL1O15357 1258 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 CALUO43852 315 aaPredicted RBP9.01□□□□□ -0.97
SF1-218ENST00000489544 EXOC3O60645 756 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 GALTP07902 379 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 NFICP08651 508 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 NR2F2P24468 414 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 CTNNB1P35222 781 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 SLC11A1P49279 550 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 BCAR1P56945 870 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 NLRP12P59046 1061 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 GRIN2CQ14957 1233 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 KLHL40Q2TBA0 621 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 EPC2Q52LR7 807 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 COBLL1Q53SF7 1204 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 XKR4Q5GH76 650 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 CEP135Q66GS9 1140 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 JADE1Q6IE81 842 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 CENPPQ6IPU0 288 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 EFCAB13Q8IY85 973 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 TRIML1Q8N9V2 468 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 XXYLT1Q8NBI6 393 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 COLGALT1Q8NBJ5 622 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 PLEKHO2Q8TD55 490 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 BCL7CQ8WUZ0 217 aaPredicted RBP9.01□□□□□ -0.97
SF1-218ENST00000489544 NELFBQ8WX92 580 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 CLP1Q92989 425 aaKnown RBP9.01□□□□□ -0.97
SF1-218ENST00000489544 P2RX5Q93086 422 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 KIF12Q96FN5 646 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 PPP1R10Q96QC0 940 aaKnown RBP9.01□□□□□ -0.97
SF1-218ENST00000489544 POP1Q99575 1024 aaKnown RBP9.01□□□□□ -0.97
SF1-218ENST00000489544 MRPL9Q9BYD2 267 aaKnown RBP9.01□□□□□ -0.97
SF1-218ENST00000489544 GZF1Q9H116 711 aaPredicted RBP9.01□□□□□ -0.97
SF1-218ENST00000489544 PDE11AQ9HCR9 933 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 TOPORSQ9NS56 1045 aaPredicted RBP9.01□□□□□ -0.97
SF1-218ENST00000489544 DMAC2Q9NW81 257 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 RBAKQ9NYW8 714 aaPredicted RBP9.01□□□□□ -0.97
SF1-218ENST00000489544 CNTN3Q9P232 1028 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 TRAF3IP3Q9Y228 551 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 PTPRJQ12913 1337 aa9.01□□□□□ -0.97
SF1-218ENST00000489544 CHD9Q3L8U1 2897 aa9□□□□□ -0.97
SF1-218ENST00000489544 ZNF233A6NK53 670 aa9□□□□□ -0.97
SF1-218ENST00000489544 NRP1O14786 923 aa9□□□□□ -0.97
SF1-218ENST00000489544 AKAP3O75969 853 aa9□□□□□ -0.97
SF1-218ENST00000489544 KIF20AO95235 890 aa9□□□□□ -0.97
SF1-218ENST00000489544 ITGB1P05556 798 aa9□□□□□ -0.97
SF1-218ENST00000489544 THP07101 528 aa9□□□□□ -0.97
SF1-218ENST00000489544 CCNE1P24864 410 aa9□□□□□ -0.97
SF1-218ENST00000489544 BMPR1AP36894 532 aa9□□□□□ -0.97
SF1-218ENST00000489544 OR1G1P47890 313 aa9□□□□□ -0.97
SF1-218ENST00000489544 ERVK-21P61565 698 aa9□□□□□ -0.97
SF1-218ENST00000489544 PPP2R3AQ06190 1150 aa9□□□□□ -0.97
SF1-218ENST00000489544 DSC1Q08554 894 aa9□□□□□ -0.97
SF1-218ENST00000489544 GRIK3Q13003 919 aa9□□□□□ -0.97
SF1-218ENST00000489544 SNRNP35Q16560 246 aaKnown RBP9□□□□□ -0.97
SF1-218ENST00000489544 TTI2Q6NXR4 508 aa9□□□□□ -0.97
SF1-218ENST00000489544 KCNT2Q6UVM3 1135 aa9□□□□□ -0.97
SF1-218ENST00000489544 C11orf57Q6ZUT1 292 aaPredicted RBP9□□□□□ -0.97
SF1-218ENST00000489544 BRSK2Q8IWQ3 736 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms