RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 NCANO14594 1321 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 MYCLP12524 364 aaPredicted RBP8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 INSRRP14616 1297 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 CEBPBP17676 345 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 ITGB6P18564 788 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 DCTP40126 519 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 VAC14Q08AM6 782 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 NEDD9Q14511 834 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 CCDC96Q2M329 555 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 USH1GQ495M9 461 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 PPM1LQ5SGD2 360 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 KIAA1614Q5VZ46 1190 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 ARMCX6Q7L4S7 300 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 TMPRSS12Q86WS5 348 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 ZNF444Q8N0Y2 327 aaPredicted RBP8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 NEDD1Q8NHV4 660 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 HIC2Q96JB3 615 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 ASB16Q96NS5 453 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 GAD1Q99259 594 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 LPIN3Q9BQK8 851 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 MFRPQ9BY79 579 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 NRSN2Q9GZP1 204 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 DBNLQ9UJU6 430 aaKnown RBP8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 PCDHGA4Q9Y5G9 962 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 ATRQ13535 2644 aa8.63□□□□□ -1.03
EXOSC3-206ENST00000489414 DIAPH2O60879 1101 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 PRDM1O75626 825 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 HSPD1P10809 573 aaKnown RBP8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 DGKEP52429 567 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 MTX1Q13505 466 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 GRM4Q14833 912 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 TBC1D25Q3MII6 688 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 SBK1Q52WX2 424 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 LPCAT2Q7L5N7 544 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 GLYCTKQ8IVS8 523 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 WWC1Q8IX03 1113 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 IL31RAQ8NI17 732 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 FAM200AQ8TCP9 573 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 DCAF4Q8WV16 495 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 SMC4Q9NTJ3 1288 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 MARCH5Q9NX47 278 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 TLR7Q9NYK1 1049 aaKnown RBP8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 FNIP2Q9P278 1114 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 PLXND1Q9Y4D7 1925 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 PCSK5Q92824 1860 aa8.62□□□□□ -1.03
EXOSC3-206ENST00000489414 PTPRCP08575 1304 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 PHLPP2Q6ZVD8 1323 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 MYLKQ15746 1914 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 BRINP1O60477 761 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 SYPP08247 313 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 ZSCAN20P17040 1043 aaPredicted RBP8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 ITPKAP23677 461 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 ACTN2P35609 894 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 TCF7P36402 384 aaPredicted RBP8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 NBR1Q14596 966 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 PGM5Q15124 567 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 PLCB4Q15147 1175 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 IGFBP7Q16270 282 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 EML3Q32P44 896 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 LIN9Q5TKA1 542 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 LYSMD4Q5XG99 296 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 ADGRD1Q6QNK2 874 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 SYT13Q7L8C5 426 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 MFSD6LQ8IWD5 586 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 ZNF248Q8NDW4 579 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 SPATA20Q8TB22 786 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 TRAPPC12Q8WVT3 735 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 FNBP1Q96RU3 617 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 OSMRQ99650 979 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 TPSD1Q9BZJ3 242 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 GBP3Q9H0R5 595 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 GPRC5CQ9NQ84 441 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 AVENQ9NQS1 362 aaPredicted RBP8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 CHST7Q9NS84 486 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 KIAA1549LQ6ZVL6 1849 aa8.61□□□□□ -1.03
EXOSC3-206ENST00000489414 CEP192Q8TEP8 1941 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 EVPLQ92817 2033 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 GOLGA8CPA6NN73 597 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 RNF40O75150 1001 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 LUC7L3O95232 432 aaKnown RBP8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 RHOP08100 348 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 TSPY3P0CV98 308 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 TSPY8P0CW00 308 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 CRYBB1P53674 252 aaPredicted RBP8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 SP4Q02446 784 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 MYO1EQ12965 1108 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 PTPRNQ16849 979 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 NOMO2Q5JPE7 1267 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 SPDYCQ5MJ68 293 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 RASSF3Q86WH2 238 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 MCF2L2Q86YR7 1114 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 GPR65Q8IYL9 337 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 SMARCD2Q92925 531 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 MOCOSQ96EN8 888 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 CCDC136Q96JN2 1154 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 CDC6Q99741 560 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 PRDM16Q9HAZ2 1276 aa8.6□□□□□ -1.03
EXOSC3-206ENST00000489414 MTMR7Q9Y216 660 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms