RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 ZNF516Q92618 1163 aa12.47□□□□□ -0.41
CMSS1-205ENST00000489081 PAWRQ96IZ0 340 aaKnown RBP12.47□□□□□ -0.41
CMSS1-205ENST00000489081 PCMTD1Q96MG8 357 aaPredicted RBP12.47□□□□□ -0.41
CMSS1-205ENST00000489081 TOX2Q96NM4 488 aa12.47□□□□□ -0.41
CMSS1-205ENST00000489081 NUP58Q9BVL2 599 aa12.47□□□□□ -0.41
CMSS1-205ENST00000489081 CCDC94Q9BW85 323 aaPredicted RBP12.47□□□□□ -0.41
CMSS1-205ENST00000489081 LSM14BQ9BX40 385 aaKnown RBP12.47□□□□□ -0.41
CMSS1-205ENST00000489081 TTYH3Q9C0H2 523 aa12.47□□□□□ -0.41
CMSS1-205ENST00000489081 TMEM117Q9H0C3 514 aa12.47□□□□□ -0.41
CMSS1-205ENST00000489081 C11orf49Q9H6J7 331 aa12.47□□□□□ -0.41
CMSS1-205ENST00000489081 TMEM8AQ9HCN3 771 aa12.47□□□□□ -0.41
CMSS1-205ENST00000489081 CHST12Q9NRB3 414 aa12.47□□□□□ -0.41
CMSS1-205ENST00000489081 PADI3Q9ULW8 664 aa12.47□□□□□ -0.41
CMSS1-205ENST00000489081 PTPRJQ12913 1337 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 DCDC2CA8MYV0 355 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 TULP1O00294 542 aaPredicted RBP12.46□□□□□ -0.41
CMSS1-205ENST00000489081 EPHB6O15197 1021 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 IL18RAPO95256 599 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 C4BPAP04003 597 aaKnown RBP12.46□□□□□ -0.41
CMSS1-205ENST00000489081 CHRM1P11229 460 aaPredicted RBP12.46□□□□□ -0.41
CMSS1-205ENST00000489081 TNNI1P19237 187 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 SLC9A1P19634 815 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 FXR1P51114 621 aaKnown RBP eCLIP12.46□□□□□ -0.41
CMSS1-205ENST00000489081 TLE2Q04725 743 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 FAAP100Q0VG06 881 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 PAK2Q13177 524 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 DSC3Q14574 896 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 ARID5BQ14865 1188 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 SLC10A6Q3KNW5 377 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 EPC2Q52LR7 807 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 LMBRD2Q68DH5 695 aaPredicted RBP12.46□□□□□ -0.41
CMSS1-205ENST00000489081 KRT39Q6A163 491 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 C15orf39Q6ZRI6 1047 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 SV2AQ7L0J3 742 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 PPFIBP1Q86W92 1011 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 WDR49Q8IV35 697 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 HS6ST3Q8IZP7 471 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 LMO3Q8TAP4 145 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 IQCDQ96DY2 449 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 ACAP3Q96P50 834 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 TRIM6Q9C030 488 aaPredicted RBP12.46□□□□□ -0.41
CMSS1-205ENST00000489081 INTS2Q9H0H0 1204 aaKnown RBP12.46□□□□□ -0.41
CMSS1-205ENST00000489081 TMX1Q9H3N1 280 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 PLCB1Q9NQ66 1216 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 FAM207AQ9NSI2 230 aaPredicted RBP12.46□□□□□ -0.41
CMSS1-205ENST00000489081 GCNT4Q9P109 453 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 COQ4Q9Y3A0 265 aa12.46□□□□□ -0.41
CMSS1-205ENST00000489081 A0A1W2PQJ5 194 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 TTC26A0AVF1 554 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 LACTBL1A8MY62 500 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 AKR1B15C9JRZ8 316 aaPredicted RBP12.45□□□□□ -0.42
CMSS1-205ENST00000489081 RNF225M0QZC1 329 aaPredicted RBP12.45□□□□□ -0.42
CMSS1-205ENST00000489081 RIOK3O14730 519 aaKnown RBP12.45□□□□□ -0.42
CMSS1-205ENST00000489081 NOL4O94818 638 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 TRIM21P19474 475 aaKnown RBP12.45□□□□□ -0.42
CMSS1-205ENST00000489081 CASP14P31944 242 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 AP3M2P53677 418 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 GOLGA8FQ08AF8 430 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 GOLGA8DPQ0D2H9 430 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 CETN1Q12798 172 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 ZACNQ401N2 412 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 TWF2Q6IBS0 349 aaKnown RBP12.45□□□□□ -0.42
CMSS1-205ENST00000489081 NECAB2Q7Z6G3 386 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 EFCAB13Q8IY85 973 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 TC2NQ8N9U0 490 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 CCDC150Q8NCX0 1101 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 EHBP1Q8NDI1 1231 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 NEK11Q8NG66 645 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 OR5B17Q8NGF7 314 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 CPLX3Q8WVH0 158 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 FAM84AQ96KN4 292 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 GANQ9H2C0 597 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 NXF3Q9H4D5 531 aaKnown RBP12.45□□□□□ -0.42
CMSS1-205ENST00000489081 ASB7Q9H672 318 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 PLEKHA5Q9HAU0 1116 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 SIX2Q9NPC8 291 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 SNTG2Q9NY99 539 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 CAPN11Q9UMQ6 739 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 FARP1Q9Y4F1 1045 aaPredicted RBP12.45□□□□□ -0.42
CMSS1-205ENST00000489081 HES2Q9Y543 173 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 IPPQ9Y573 584 aa12.45□□□□□ -0.42
CMSS1-205ENST00000489081 BRCA2P51587 3418 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 MGEA5O60502 916 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 MFAP3LO75121 409 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 RECQL4O94761 1208 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 TPM1P09493 284 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 ACTN1P12814 892 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 ZSCAN20P17040 1043 aaPredicted RBP12.44□□□□□ -0.42
CMSS1-205ENST00000489081 ADKP55263 362 aaKnown RBP12.44□□□□□ -0.42
CMSS1-205ENST00000489081 APBA1Q02410 837 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 GPNMBQ14956 572 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 LRRC26Q2I0M4 334 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 HS1BP3Q53T59 392 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 KLHDC7AQ5VTJ3 777 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 TDRD10Q5VZ19 366 aaKnown RBP12.44□□□□□ -0.42
CMSS1-205ENST00000489081 TRIM65Q6PJ69 517 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 CD302Q8IX05 232 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 SMG8Q8ND04 991 aaKnown RBP12.44□□□□□ -0.42
CMSS1-205ENST00000489081 FBXL13Q8NEE6 735 aa12.44□□□□□ -0.42
CMSS1-205ENST00000489081 TAS1R2Q8TE23 839 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms