RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ELMSAN1Q6PJG2 1045 aa25.24■■□□□ 1.63
COL9A3-213ENST00000489045 PRSS55Q6UWB4 352 aaPredicted RBP25.24■■□□□ 1.63
COL9A3-213ENST00000489045 C15orf39Q6ZRI6 1047 aa25.24■■□□□ 1.63
COL9A3-213ENST00000489045 CMASQ8NFW8 434 aaPredicted RBP25.24■■□□□ 1.63
COL9A3-213ENST00000489045 SPIRE2Q8WWL2 714 aa25.24■■□□□ 1.63
COL9A3-213ENST00000489045 NTPCRQ9BSD7 190 aaKnown RBP25.24■■□□□ 1.63
COL9A3-213ENST00000489045 CCDC94Q9BW85 323 aaPredicted RBP25.24■■□□□ 1.63
COL9A3-213ENST00000489045 BACH2Q9BYV9 841 aa25.24■■□□□ 1.63
COL9A3-213ENST00000489045 DPP7Q9UHL4 492 aa25.24■■□□□ 1.63
COL9A3-213ENST00000489045 SLC26A4O43511 780 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 SPATA31D3P0C874 917 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 PDCP20941 246 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 PROZP22891 400 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 UBA7P41226 1012 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 YARSP54577 528 aaKnown RBP25.23■■□□□ 1.63
COL9A3-213ENST00000489045 CREMQ03060 361 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 GRIN1Q05586 938 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 SIGLEC14Q08ET2 396 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 FAM171A1Q5VUB5 890 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 MPZL3Q6UWV2 235 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 SPATA31D4Q6ZUB0 917 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 CCDC149Q6ZUS6 474 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 CEP57Q86XR8 500 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 TMEM161BQ8NDZ6 487 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 CALML4Q96GE6 196 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 MFSD14AQ96MC6 490 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 TTPALQ9BTX7 342 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 TOPORSQ9NS56 1045 aaPredicted RBP25.23■■□□□ 1.63
COL9A3-213ENST00000489045 USTQ9Y2C2 406 aa25.23■■□□□ 1.63
COL9A3-213ENST00000489045 KMT2EQ8IZD2 1858 aa25.22■■□□□ 1.63
COL9A3-213ENST00000489045 ABLIM1O14639 778 aa25.22■■□□□ 1.63
COL9A3-213ENST00000489045 TGM5O43548 720 aa25.22■■□□□ 1.63
COL9A3-213ENST00000489045 RFPL2O75678 378 aa25.22■■□□□ 1.63
COL9A3-213ENST00000489045 MCF2P10911 925 aa25.22■■□□□ 1.63
COL9A3-213ENST00000489045 SMTNP53814 917 aa25.22■■□□□ 1.63
COL9A3-213ENST00000489045 STRN3Q13033 797 aa25.22■■□□□ 1.63
COL9A3-213ENST00000489045 ARSHQ5FYA8 562 aa25.22■■□□□ 1.63
COL9A3-213ENST00000489045 BMP8AQ7Z5Y6 402 aa25.22■■□□□ 1.63
COL9A3-213ENST00000489045 ZDHHC14Q8IZN3 488 aa25.22■■□□□ 1.63
COL9A3-213ENST00000489045 KREMEN2Q8NCW0 462 aa25.22■■□□□ 1.63
COL9A3-213ENST00000489045 LRRC15Q8TF66 581 aa25.22■■□□□ 1.63
COL9A3-213ENST00000489045 TCHPQ9BT92 498 aa25.22■■□□□ 1.63
COL9A3-213ENST00000489045 GOLGA2P5Q9HBQ8 144 aa25.22■■□□□ 1.63
COL9A3-213ENST00000489045 SMIM28A0A1B0GU29 152 aa25.21■■□□□ 1.63
COL9A3-213ENST00000489045 CCDC195A0A1B0GUA6 201 aa25.21■■□□□ 1.63
COL9A3-213ENST00000489045 MAPTP10636 758 aaKnown RBP25.21■■□□□ 1.63
COL9A3-213ENST00000489045 HARSP12081 509 aaKnown RBP25.21■■□□□ 1.63
COL9A3-213ENST00000489045 LONP1P36776 959 aaKnown RBP25.21■■□□□ 1.63
COL9A3-213ENST00000489045 ELAVL2Q12926 359 aaKnown RBP25.21■■□□□ 1.63
COL9A3-213ENST00000489045 GPBP1Q86WP2 473 aa25.21■■□□□ 1.63
COL9A3-213ENST00000489045 HDAC7Q8WUI4 952 aa25.21■■□□□ 1.63
COL9A3-213ENST00000489045 PIK3R5Q8WYR1 880 aa25.21■■□□□ 1.63
COL9A3-213ENST00000489045 PBXIP1Q96AQ6 731 aa25.21■■□□□ 1.63
COL9A3-213ENST00000489045 ZBTB45Q96K62 511 aaPredicted RBP25.21■■□□□ 1.63
COL9A3-213ENST00000489045 PLEKHA4Q9H4M7 779 aa25.21■■□□□ 1.63
COL9A3-213ENST00000489045 KCNG1Q9UIX4 513 aa25.21■■□□□ 1.63
COL9A3-213ENST00000489045 SORCS3Q9UPU3 1222 aa25.21■■□□□ 1.63
COL9A3-213ENST00000489045 TMEM189-UBE2V1I3L0A0 370 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 BRD1O95696 1058 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 C1RP00736 705 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 PLCG1P19174 1290 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 IGFBP6P24592 240 aaPredicted RBP25.2■■□□□ 1.62
COL9A3-213ENST00000489045 CLCNKBP51801 687 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 MTMR3Q13615 1198 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 DHX8Q14562 1220 aaKnown RBP25.2■■□□□ 1.62
COL9A3-213ENST00000489045 KARSQ15046 597 aaKnown RBP25.2■■□□□ 1.62
COL9A3-213ENST00000489045 PSMD5Q16401 504 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 XKR4Q5GH76 650 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 LILRA6Q6PI73 481 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 ALKAL1Q6UXT8 129 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 PLCD3Q8N3E9 789 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 LNX1Q8TBB1 728 aaPredicted RBP25.2■■□□□ 1.62
COL9A3-213ENST00000489045 ASIC4Q96FT7 647 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 SNX27Q96L92 541 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 UROC1Q96N76 676 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 REEP2Q9BRK0 252 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 BLOC1S4Q9NUP1 217 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 LARSQ9P2J5 1176 aaKnown RBP25.2■■□□□ 1.62
COL9A3-213ENST00000489045 ANKFY1Q9P2R3 1169 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 LIMD1Q9UGP4 676 aa25.2■■□□□ 1.62
COL9A3-213ENST00000489045 B3GAT3O94766 335 aa25.19■■□□□ 1.62
COL9A3-213ENST00000489045 ASGR2P07307 311 aa25.19■■□□□ 1.62
COL9A3-213ENST00000489045 NCKAP1LP55160 1127 aa25.19■■□□□ 1.62
COL9A3-213ENST00000489045 SOX4Q06945 474 aaPredicted RBP25.19■■□□□ 1.62
COL9A3-213ENST00000489045 OTOP3Q7RTS5 596 aa25.19■■□□□ 1.62
COL9A3-213ENST00000489045 RASSF8Q8NHQ8 419 aa25.19■■□□□ 1.62
COL9A3-213ENST00000489045 ACSF2Q96CM8 615 aaPredicted RBP25.19■■□□□ 1.62
COL9A3-213ENST00000489045 ACAP3Q96P50 834 aa25.19■■□□□ 1.62
COL9A3-213ENST00000489045 CLSTN3Q9BQT9 956 aa25.19■■□□□ 1.62
COL9A3-213ENST00000489045 ODF2LQ9ULJ1 636 aa25.19■■□□□ 1.62
COL9A3-213ENST00000489045 CLIC4Q9Y696 253 aa25.19■■□□□ 1.62
COL9A3-213ENST00000489045 ZDBF2Q9HCK1 2354 aa25.19■■□□□ 1.62
COL9A3-213ENST00000489045 MYH15Q9Y2K3 1946 aa25.18■■□□□ 1.62
COL9A3-213ENST00000489045 TOM1L1O75674 476 aa25.18■■□□□ 1.62
COL9A3-213ENST00000489045 SYT1P21579 422 aa25.18■■□□□ 1.62
COL9A3-213ENST00000489045 RESTQ13127 1097 aa25.18■■□□□ 1.62
COL9A3-213ENST00000489045 NOLC1Q14978 699 aaKnown RBP eCLIP25.18■■□□□ 1.62
COL9A3-213ENST00000489045 UPP1Q16831 310 aa25.18■■□□□ 1.62
COL9A3-213ENST00000489045 DCLRE1AQ6PJP8 1040 aa25.18■■□□□ 1.62
COL9A3-213ENST00000489045 CYP26C1Q6V0L0 522 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms