RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 ST18O60284 1047 aa28.6■■■□□ 2.17
RNF220-216ENST00000488865 NPR3P17342 541 aa28.6■■■□□ 2.17
RNF220-216ENST00000488865 TOB1P50616 345 aaPredicted RBP28.6■■■□□ 2.17
RNF220-216ENST00000488865 PTGDRQ13258 359 aa28.6■■■□□ 2.17
RNF220-216ENST00000488865 PSMD5Q16401 504 aa28.6■■■□□ 2.17
RNF220-216ENST00000488865 ATF7IP2Q5U623 682 aa28.6■■■□□ 2.17
RNF220-216ENST00000488865 CEP57Q86XR8 500 aa28.6■■■□□ 2.17
RNF220-216ENST00000488865 CLSTN3Q9BQT9 956 aa28.6■■■□□ 2.17
RNF220-216ENST00000488865 POLD4Q9HCU8 107 aa28.6■■■□□ 2.17
RNF220-216ENST00000488865 WNT16Q9UBV4 365 aa28.6■■■□□ 2.17
RNF220-216ENST00000488865 PROB1E7EW31 1015 aa28.59■■■□□ 2.17
RNF220-216ENST00000488865 K7ERI5 159 aa28.59■■■□□ 2.17
RNF220-216ENST00000488865 GFRA3O60609 400 aa28.59■■■□□ 2.17
RNF220-216ENST00000488865 AOC1P19801 751 aa28.59■■■□□ 2.17
RNF220-216ENST00000488865 SIX5Q8N196 739 aa28.59■■■□□ 2.17
RNF220-216ENST00000488865 SLC44A3Q8N4M1 653 aa28.59■■■□□ 2.17
RNF220-216ENST00000488865 SNX29Q8TEQ0 813 aa28.59■■■□□ 2.17
RNF220-216ENST00000488865 RSAD2Q8WXG1 361 aa28.59■■■□□ 2.17
RNF220-216ENST00000488865 TMEM189-UBE2V1I3L0A0 370 aa28.58■■■□□ 2.17
RNF220-216ENST00000488865 LAD1O00515 517 aa28.58■■■□□ 2.17
RNF220-216ENST00000488865 NARSO43776 548 aaKnown RBP28.58■■■□□ 2.17
RNF220-216ENST00000488865 HNRNPA1P09651 372 aaKnown RBP eCLIP28.58■■■□□ 2.17
RNF220-216ENST00000488865 LAMP2P13473 410 aa28.58■■■□□ 2.17
RNF220-216ENST00000488865 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.58■■■□□ 2.17
RNF220-216ENST00000488865 PPP1R10Q96QC0 940 aaKnown RBP28.58■■■□□ 2.17
RNF220-216ENST00000488865 RTP3Q9BQQ7 232 aa28.58■■■□□ 2.17
RNF220-216ENST00000488865 DNM3Q9UQ16 869 aa28.58■■■□□ 2.17
RNF220-216ENST00000488865 TNFSF13BQ9Y275 285 aa28.58■■■□□ 2.17
RNF220-216ENST00000488865 PCDHB6Q9Y5E3 794 aa28.58■■■□□ 2.17
RNF220-216ENST00000488865 ZFP37Q9Y6Q3 630 aaPredicted RBP28.58■■■□□ 2.17
RNF220-216ENST00000488865 LIN9Q5TKA1 542 aa28.57■■■□□ 2.16
RNF220-216ENST00000488865 DCLRE1AQ6PJP8 1040 aa28.57■■■□□ 2.16
RNF220-216ENST00000488865 GET4Q7L5D6 327 aaPredicted RBP28.57■■■□□ 2.16
RNF220-216ENST00000488865 SRFP11831 508 aa28.56■■■□□ 2.16
RNF220-216ENST00000488865 HOXA9P31269 272 aa28.56■■■□□ 2.16
RNF220-216ENST00000488865 PRPHP41219 470 aa28.56■■■□□ 2.16
RNF220-216ENST00000488865 NBL1P41271 181 aa28.56■■■□□ 2.16
RNF220-216ENST00000488865 KRT79Q5XKE5 535 aa28.56■■■□□ 2.16
RNF220-216ENST00000488865 PHLPP2Q6ZVD8 1323 aa28.56■■■□□ 2.16
RNF220-216ENST00000488865 UROC1Q96N76 676 aa28.56■■■□□ 2.16
RNF220-216ENST00000488865 TMEM134Q9H6X4 195 aa28.56■■■□□ 2.16
RNF220-216ENST00000488865 MYO15AQ9UKN7 3530 aa28.56■■■□□ 2.16
RNF220-216ENST00000488865 ZFHX2Q9C0A1 2572 aaPredicted RBP28.56■■■□□ 2.16
RNF220-216ENST00000488865 ANHXE9PGG2 379 aa28.55■■■□□ 2.16
RNF220-216ENST00000488865 PI15O43692 258 aa28.55■■■□□ 2.16
RNF220-216ENST00000488865 FGFR3P22607 806 aa28.55■■■□□ 2.16
RNF220-216ENST00000488865 NPTX2P47972 431 aa28.55■■■□□ 2.16
RNF220-216ENST00000488865 PEX3P56589 373 aa28.55■■■□□ 2.16
RNF220-216ENST00000488865 RAB33AQ14088 237 aa28.55■■■□□ 2.16
RNF220-216ENST00000488865 VWA8A3KMH1 1905 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 CCDC169A6NNP5 214 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 B3GAT3O94766 335 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 C8AP07357 584 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 CFHP08603 1231 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 FSHRP23945 695 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 GRM5P41594 1212 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 DMP1Q13316 513 aaPredicted RBP28.54■■■□□ 2.16
RNF220-216ENST00000488865 UPP1Q16831 310 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 XKR4Q5GH76 650 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 GLRA4Q5JXX5 417 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 PPM1LQ5SGD2 360 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 DTHD1Q6ZMT9 781 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 CCDC105Q8IYK2 499 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 DAW1Q8N136 415 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 DRC1Q96MC2 740 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 ACO2Q99798 780 aaKnown RBP28.54■■■□□ 2.16
RNF220-216ENST00000488865 CCDC94Q9BW85 323 aaPredicted RBP28.54■■■□□ 2.16
RNF220-216ENST00000488865 C17orf75Q9HAS0 396 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 PTPRHQ9HD43 1115 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 TOPORSQ9NS56 1045 aaPredicted RBP28.54■■■□□ 2.16
RNF220-216ENST00000488865 ARHGAP28Q9P2N2 729 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 KIF3AQ9Y496 699 aa28.54■■■□□ 2.16
RNF220-216ENST00000488865 RBM19Q9Y4C8 960 aaKnown RBP28.54■■■□□ 2.16
RNF220-216ENST00000488865 E9PMD0 336 aa28.53■■■□□ 2.16
RNF220-216ENST00000488865 ADAM12O43184 909 aa28.53■■■□□ 2.16
RNF220-216ENST00000488865 HIP1RO75146 1068 aa28.53■■■□□ 2.16
RNF220-216ENST00000488865 POU2F2P09086 479 aa28.53■■■□□ 2.16
RNF220-216ENST00000488865 CLCNKBP51801 687 aa28.53■■■□□ 2.16
RNF220-216ENST00000488865 YARSP54577 528 aaKnown RBP28.53■■■□□ 2.16
RNF220-216ENST00000488865 HTR4Q13639 388 aa28.53■■■□□ 2.16
RNF220-216ENST00000488865 IL17AQ16552 155 aa28.53■■■□□ 2.16
RNF220-216ENST00000488865 UVSSAQ2YD98 709 aa28.53■■■□□ 2.16
RNF220-216ENST00000488865 RTL10Q7L3V2 364 aa28.53■■■□□ 2.16
RNF220-216ENST00000488865 GRASPQ7Z6J2 395 aaPredicted RBP28.53■■■□□ 2.16
RNF220-216ENST00000488865 MRPL4Q9BYD3 311 aaKnown RBP28.53■■■□□ 2.16
RNF220-216ENST00000488865 CDT1Q9H211 546 aa28.53■■■□□ 2.16
RNF220-216ENST00000488865 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.53■■■□□ 2.16
RNF220-216ENST00000488865 MTRRQ9UBK8 725 aa28.53■■■□□ 2.16
RNF220-216ENST00000488865 VPS13AQ96RL7 3174 aa28.53■■■□□ 2.16
RNF220-216ENST00000488865 CFAP54Q96N23 3096 aa28.53■■■□□ 2.16
RNF220-216ENST00000488865 TRIP11Q15643 1979 aa28.52■■■□□ 2.16
RNF220-216ENST00000488865 SMIM28A0A1B0GU29 152 aa28.52■■■□□ 2.16
RNF220-216ENST00000488865 KRBA1A5PL33 1030 aa28.52■■■□□ 2.16
RNF220-216ENST00000488865 PP2D1A8MPX8 630 aa28.52■■■□□ 2.16
RNF220-216ENST00000488865 TRAPPC3O43617 180 aa28.52■■■□□ 2.16
RNF220-216ENST00000488865 C8orf34Q49A92 452 aa28.52■■■□□ 2.16
RNF220-216ENST00000488865 RINT1Q6NUQ1 792 aa28.52■■■□□ 2.16
RNF220-216ENST00000488865 ALKAL1Q6UXT8 129 aa28.52■■■□□ 2.16
RNF220-216ENST00000488865 RUSC1Q9BVN2 902 aa28.52■■■□□ 2.16
RNF220-216ENST00000488865 TIPINQ9BVW5 301 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms