RNA–Protein interactions for RNA: ENST00000488592.1

SCMH1-215, Transcript of Scm polycomb group protein homolog 1, human

TSL 2

Gene SCMH1, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCMH1-215	ENST00000488592	ZNF707	Q96C28	371 aa	Predicted RBP	13.8	□□□□□ -0.2
SCMH1-215	ENST00000488592	PPP1R10	Q96QC0	940 aa	Known RBP	13.8	□□□□□ -0.2
SCMH1-215	ENST00000488592	NTPCR	Q9BSD7	190 aa	Known RBP	13.8	□□□□□ -0.2
SCMH1-215	ENST00000488592	MRPL4	Q9BYD3	311 aa	Known RBP	13.8	□□□□□ -0.2
SCMH1-215	ENST00000488592	NT5C3A	Q9H0P0	336 aa		13.8	□□□□□ -0.2
SCMH1-215	ENST00000488592	KCNK12	Q9HB15	430 aa		13.8	□□□□□ -0.2
SCMH1-215	ENST00000488592	SLC38A7	Q9NVC3	462 aa		13.8	□□□□□ -0.2
SCMH1-215	ENST00000488592	SNTG2	Q9NY99	539 aa		13.8	□□□□□ -0.2
SCMH1-215	ENST00000488592	KLK14	Q9P0G3	267 aa		13.8	□□□□□ -0.2
SCMH1-215	ENST00000488592	FAM186A	A6NE01	2351 aa		13.8	□□□□□ -0.2
SCMH1-215	ENST00000488592	RIF1	Q5UIP0	2472 aa	Known RBP	13.8	□□□□□ -0.2
SCMH1-215	ENST00000488592	DOCK6	Q96HP0	2047 aa		13.8	□□□□□ -0.2
SCMH1-215	ENST00000488592		A0A087WWV3	80 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	TTLL13P	A6NNM8	815 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592		F8W810	466 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	TRAPPC3	O43617	180 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	ZMYND10	O75800	440 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	KIF4A	O95239	1232 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	ASGR2	P07307	311 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	GRM5	P41594	1212 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	ATP2C1	P98194	919 aa	Predicted RBP	13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	ECM1	Q16610	540 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	UVSSA	Q2YD98	709 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	RTP2	Q5QGT7	225 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	KANK3	Q6NY19	840 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	SPIRE2	Q8WWL2	714 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	DDX27	Q96GQ7	796 aa	Known RBP	13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	PTPRH	Q9HD43	1115 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	WNT16	Q9UBV4	365 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	PCDHB6	Q9Y5E3	794 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	USP34	Q70CQ2	3546 aa		13.79	□□□□□ -0.2
SCMH1-215	ENST00000488592	CASTOR2	A6NHX0	329 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	PROB1	E7EW31	1015 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592		H0YCG3	227 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	MCF2	P10911	925 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	FGFR3	P22607	806 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	PROZ	P22891	400 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	NPTX2	P47972	431 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	YARS	P54577	528 aa	Known RBP	13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	PSMD5	Q16401	504 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	NT5DC1	Q5TFE4	455 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	LIN9	Q5TKA1	542 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	FAM171A1	Q5VUB5	890 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	EEF1DP3	Q658K8	133 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	DCLRE1A	Q6PJP8	1040 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	C1orf186	Q6ZWK4	172 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	LNX1	Q8TBB1	728 aa	Predicted RBP	13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	AK8	Q96MA6	479 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	ACO2	Q99798	780 aa	Known RBP	13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	RTP3	Q9BQQ7	232 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	CCDC94	Q9BW85	323 aa	Predicted RBP	13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	MFSD1	Q9H3U5	465 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	UPF2	Q9HAU5	1272 aa	Known RBP	13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	BACE2	Q9Y5Z0	518 aa		13.78	□□□□□ -0.2
SCMH1-215	ENST00000488592	ANHX	E9PGG2	379 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	N4BP1	O75113	896 aa	Known RBP	13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	HIP1R	O75146	1068 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	XYLB	O75191	536 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	RFPL2	O75678	378 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	BMP15	O95972	392 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	EDN1	P05305	212 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	SRF	P11831	508 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	KCNE1	P15382	129 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	PTPRZ1	P23471	2315 aa	Predicted RBP	13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	RAB33A	Q14088	237 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	UPP1	Q16831	310 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	RINT1	Q6NUQ1	792 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	ALKAL1	Q6UXT8	129 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	ANKS3	Q6ZW76	656 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	DAW1	Q8N136	415 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	CLSTN3	Q9BQT9	956 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	PAAF1	Q9BRP4	392 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	MMTAG2	Q9BU76	263 aa	Known RBP	13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	KIFC3	Q9BVG8	833 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	CDT1	Q9H211	546 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	PIDD1	Q9HB75	910 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	KMT5A	Q9NQR1	393 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	MTRR	Q9UBK8	725 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	MYH15	Q9Y2K3	1946 aa		13.77	□□□□□ -0.21
SCMH1-215	ENST00000488592	CCDC169	A6NNP5	214 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	SYN3	O14994	580 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	B3GAT3	O94766	335 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	PDGFB	P01127	241 aa	Predicted RBP	13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	LAMP2	P13473	410 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	AOC1	P19801	751 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	GBP2	P32456	591 aa	Predicted RBP	13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	RPL9	P32969	192 aa	Known RBP	13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	ABCD1	P33897	745 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	SMTN	P53814	917 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	PEX3	P56589	373 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	MAPK7	Q13164	816 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	NBR1	Q14596	966 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	ZNF568	Q3ZCX4	644 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	MPZL3	Q6UWV2	235 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	ZPBP2	Q6X784	338 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	PALB2	Q86YC2	1186 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	TMEM105	Q8N8V8	129 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	SYT2	Q8N9I0	419 aa	Predicted RBP	13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	B3GALT6	Q96L58	329 aa		13.76	□□□□□ -0.21
SCMH1-215	ENST00000488592	TSPAN18	Q96SJ8	248 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms