RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 CALM2P0DP24 149 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 CALM3P0DP25 149 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 CKBP12277 381 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 FOSL2P15408 326 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 ITGB5P18084 799 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 MARK3P27448 753 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 GNAQP50148 359 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 NAPAP54920 295 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 RACK1P63244 317 aaKnown RBP6.75□□□□□ -1.33
CDHR3-213ENST00000488386 CCT2P78371 535 aaKnown RBP6.75□□□□□ -1.33
CDHR3-213ENST00000488386 ZNF618Q5T7W0 954 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 JAKMIP3Q5VZ66 844 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 BLOC1S2Q6QNY1 142 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.75□□□□□ -1.33
CDHR3-213ENST00000488386 TMTC2Q8N394 836 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 MAFAQ8NHW3 353 aaPredicted RBP6.75□□□□□ -1.33
CDHR3-213ENST00000488386 RASGRP4Q8TDF6 673 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 PHKBQ93100 1093 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 INPP4AQ96PE3 977 aaPredicted RBP6.75□□□□□ -1.33
CDHR3-213ENST00000488386 GPR20Q99678 358 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 LZTS2Q9BRK4 669 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 MTA3Q9BTC8 594 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 NCOA5Q9HCD5 579 aaKnown RBP6.75□□□□□ -1.33
CDHR3-213ENST00000488386 SETD4Q9NVD3 440 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 MAP3K20Q9NYL2 800 aaKnown RBP6.75□□□□□ -1.33
CDHR3-213ENST00000488386 PCOLCE2Q9UKZ9 415 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 SLC4A7Q9Y6M7 1214 aa6.75□□□□□ -1.33
CDHR3-213ENST00000488386 SIP14410 1827 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 GSTTP1A0A1W2PQM5 241 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 SMCO2A6NFE2 343 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 EPOPA6NHQ4 379 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 FIBPO43427 364 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 LEFTY1O75610 366 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 ARP10275 920 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 KCNA2P16389 499 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 ATP2A2P16615 1042 aaKnown RBP6.74□□□□□ -1.33
CDHR3-213ENST00000488386 RPS6KB1P23443 525 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 SMARCA1P28370 1054 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 ICAM3P32942 547 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 THPOP40225 353 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 METAP2P50579 478 aaKnown RBP eCLIP6.74□□□□□ -1.33
CDHR3-213ENST00000488386 ETF1P62495 437 aaKnown RBP6.74□□□□□ -1.33
CDHR3-213ENST00000488386 DEFB103AP81534 67 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 STK3Q13188 491 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 BFSP2Q13515 415 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 SLBPQ14493 270 aaKnown RBP eCLIP6.74□□□□□ -1.33
CDHR3-213ENST00000488386 TRIM71Q2Q1W2 868 aaKnown RBP6.74□□□□□ -1.33
CDHR3-213ENST00000488386 GNPTABQ3T906 1256 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 KRT40Q6A162 431 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 LRRC8DQ7L1W4 858 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 ZNF765Q7L2R6 523 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 RPUSD2Q8IZ73 545 aaKnown RBP6.74□□□□□ -1.33
CDHR3-213ENST00000488386 SAMD3Q8N6K7 520 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 ANO3Q9BYT9 981 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 UPF3BQ9BZI7 483 aaKnown RBP6.74□□□□□ -1.33
CDHR3-213ENST00000488386 RNPEPQ9H4A4 650 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 SSU72Q9NP77 194 aaKnown RBP6.74□□□□□ -1.33
CDHR3-213ENST00000488386 RBM28Q9NW13 759 aaKnown RBP6.74□□□□□ -1.33
CDHR3-213ENST00000488386 UBP1Q9NZI7 540 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 MSRAQ9UJ68 235 aa6.74□□□□□ -1.33
CDHR3-213ENST00000488386 C17orf102A2RUQ5 167 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 LCHNA4D1U4 455 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 PPFIA4O75335 1185 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 BPNT1O95861 308 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 CA3P07451 260 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 FAM87AP0C7U9 286 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 TCF7P36402 384 aaPredicted RBP6.73□□□□□ -1.33
CDHR3-213ENST00000488386 ADCY7P51828 1080 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 WDR5P61964 334 aaKnown RBP6.73□□□□□ -1.33
CDHR3-213ENST00000488386 IGBP1P78318 339 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 TRAF1Q13077 416 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 MTMR1Q13613 665 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 TOB2Q14106 344 aaPredicted RBP6.73□□□□□ -1.33
CDHR3-213ENST00000488386 MPP2Q14168 576 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 NEDD9Q14511 834 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 KRT32Q14532 448 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 PKN1Q16512 942 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 KCNV1Q6PIU1 500 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 METTL7BQ6UX53 244 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.73□□□□□ -1.33
CDHR3-213ENST00000488386 RUFY4Q6ZNE9 571 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 ARMCX6Q7L4S7 300 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 TRMT1LQ7Z2T5 733 aaKnown RBP6.73□□□□□ -1.33
CDHR3-213ENST00000488386 REC114Q7Z4M0 266 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 NLRX1Q86UT6 975 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 SESTD1Q86VW0 696 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 AFAP1L1Q8TED9 768 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 TRAPPC12Q8WVT3 735 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 ATP6V0A1Q93050 837 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 EAF1Q96JC9 268 aaPredicted RBP6.73□□□□□ -1.33
CDHR3-213ENST00000488386 PCYT2Q99447 389 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 KATNAL1Q9BW62 490 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 SLC26A6Q9BXS9 759 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 SEZ6LQ9BYH1 1024 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 MAF1Q9H063 256 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 RIC8AQ9NPQ8 531 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 JADE2Q9NQC1 790 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 VPS54Q9P1Q0 977 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 TJP2Q9UDY2 1190 aa6.73□□□□□ -1.33
CDHR3-213ENST00000488386 MTUS1Q9ULD2 1270 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms