RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 ZFP28Q8NHY6 868 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 SMAD5Q99717 465 aaKnown RBP5.55□□□□□ -1.52
LINC00888-204ENST00000487386 MRI1Q9BV20 369 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 ZNF341Q9BYN7 854 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 CSRNP2Q9H175 543 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 TMEM140Q9NV12 185 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 GPRC5BQ9NZH0 403 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 SLC23A1Q9UHI7 598 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 SAP30BPQ9UHR5 308 aaKnown RBP5.55□□□□□ -1.52
LINC00888-204ENST00000487386 SORCS3Q9UPU3 1222 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 CHST2Q9Y4C5 530 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 ACTL7AQ9Y615 435 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 DRGXA6NNA5 263 aa5.54□□□□□ -1.52
LINC00888-204ENST00000487386 FAM20BO75063 409 aa5.54□□□□□ -1.52
LINC00888-204ENST00000487386 ZSCAN20P17040 1043 aaPredicted RBP5.54□□□□□ -1.52
LINC00888-204ENST00000487386 NCLP19338 710 aaKnown RBP5.54□□□□□ -1.52
LINC00888-204ENST00000487386 ZFP36P26651 326 aaKnown RBP5.54□□□□□ -1.52
LINC00888-204ENST00000487386 RECQLP46063 649 aaPredicted RBP5.54□□□□□ -1.52
LINC00888-204ENST00000487386 ALDH1A3P47895 512 aa5.54□□□□□ -1.52
LINC00888-204ENST00000487386 ADKP55263 362 aaKnown RBP5.54□□□□□ -1.52
LINC00888-204ENST00000487386 IGBP1P78318 339 aa5.54□□□□□ -1.52
LINC00888-204ENST00000487386 NHLH2Q02577 135 aa5.54□□□□□ -1.52
LINC00888-204ENST00000487386 RRP12Q5JTH9 1297 aaKnown RBP5.54□□□□□ -1.52
LINC00888-204ENST00000487386 TMEM240Q5SV17 173 aa5.54□□□□□ -1.52
LINC00888-204ENST00000487386 ATXN7L2Q5T6C5 722 aaPredicted RBP5.54□□□□□ -1.52
LINC00888-204ENST00000487386 FAM102AQ5T9C2 384 aaPredicted RBP5.54□□□□□ -1.52
LINC00888-204ENST00000487386 SEM1Q6ZVN7 128 aa5.54□□□□□ -1.52
LINC00888-204ENST00000487386 RHOUQ7L0Q8 258 aa5.54□□□□□ -1.52
LINC00888-204ENST00000487386 RNF169Q8NCN4 708 aa5.54□□□□□ -1.52
LINC00888-204ENST00000487386 CCHCR1Q8TD31 782 aa5.54□□□□□ -1.52
LINC00888-204ENST00000487386 HDAC10Q969S8 669 aa5.54□□□□□ -1.52
LINC00888-204ENST00000487386 DCLRE1CQ96SD1 692 aaKnown RBP5.54□□□□□ -1.52
LINC00888-204ENST00000487386 DDX56Q9NY93 547 aaKnown RBP5.54□□□□□ -1.52
LINC00888-204ENST00000487386 SERPINB13Q9UIV8 391 aa5.54□□□□□ -1.52
LINC00888-204ENST00000487386 MYBBP1AQ9BQG0 1328 aaKnown RBP5.53□□□□□ -1.52
LINC00888-204ENST00000487386 DIRC3C9JPN6 131 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 TEX33O43247 280 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 SGTAO43765 313 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 FZD7O75084 574 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 GPR32O75388 356 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 RECQL4O94761 1208 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 PDGFRBP09619 1106 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 DDCP20711 480 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 KIF23Q02241 960 aaPredicted RBP5.53□□□□□ -1.52
LINC00888-204ENST00000487386 TARDBPQ13148 414 aaKnown RBP eCLIP5.53□□□□□ -1.52
LINC00888-204ENST00000487386 C3orf36Q3SXR2 165 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 RHOT1Q8IXI2 618 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 CMTR2Q8IYT2 770 aaKnown RBP5.53□□□□□ -1.52
LINC00888-204ENST00000487386 CPT1CQ8TCG5 803 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 SLC25A43Q8WUT9 341 aaPredicted RBP5.53□□□□□ -1.52
LINC00888-204ENST00000487386 LENG9Q96B70 501 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 CHMP4CQ96CF2 233 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 DMRTA2Q96SC8 542 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 NEU1Q99519 415 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 MYOCQ99972 504 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 SLC46A2Q9BY10 475 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 ZNF768Q9H5H4 540 aaKnown RBP5.53□□□□□ -1.52
LINC00888-204ENST00000487386 SLC2A4RGQ9NR83 387 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 POGKQ9P215 609 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 EIF2B4Q9UI10 523 aaKnown RBP5.53□□□□□ -1.52
LINC00888-204ENST00000487386 PCDHA13Q9Y5I0 950 aa5.53□□□□□ -1.52
LINC00888-204ENST00000487386 CCDC154A6NI56 674 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 SCAF4O95104 1147 aaKnown RBP5.52□□□□□ -1.53
LINC00888-204ENST00000487386 ZNF202O95125 648 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 RAP2AP10114 183 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 ATP5JP18859 108 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 CCND1P24385 295 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 NEK2P51955 445 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 CHN2P52757 468 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 CTXN1P60606 82 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 CDC42EP1Q00587 391 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 IL10RAQ13651 578 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 MIGA2Q7L4E1 593 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 PLXDC1Q8IUK5 500 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 DRC7Q8IY82 874 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 CPA6Q8N4T0 437 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 ZNF276Q8N554 614 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 ZNF483Q8TF39 744 aaPredicted RBP5.52□□□□□ -1.53
LINC00888-204ENST00000487386 TCF7L1Q9HCS4 588 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 DKK2Q9UBU2 259 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 PCDHB1Q9Y5F3 818 aa5.52□□□□□ -1.53
LINC00888-204ENST00000487386 ZNF185O15231 689 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 AKAP8O43823 692 aaKnown RBP5.51□□□□□ -1.53
LINC00888-204ENST00000487386 SNUPNO95149 360 aaKnown RBP5.51□□□□□ -1.53
LINC00888-204ENST00000487386 POMCP01189 267 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 RNASE9P60153 205 aaKnown RBP5.51□□□□□ -1.53
LINC00888-204ENST00000487386 FAM189BP81408 668 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 UBXN2BQ14CS0 331 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 DACT2Q5SW24 774 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 AGAP9Q5VTM2 703 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 GDF7Q7Z4P5 450 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 MRGPREQ86SM8 312 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 DCBLD1Q8N8Z6 715 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 SLC16A11Q8NCK7 471 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 IFI44Q8TCB0 444 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 MRGPRX4Q96LA9 322 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 TEX101Q9BY14 249 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 SCAND2PQ9GZW5 306 aaPredicted RBP5.51□□□□□ -1.53
LINC00888-204ENST00000487386 TMPRSS5Q9H3S3 457 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 MMRN2Q9H8L6 949 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms