RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 TOPORSQ9NS56 1045 aaPredicted RBP20.95■□□□□ 0.94
CLIP2-206ENST00000487091 TMEM221A6NGB7 291 aa20.94■□□□□ 0.94
CLIP2-206ENST00000487091 TMEM189-UBE2V1I3L0A0 370 aa20.94■□□□□ 0.94
CLIP2-206ENST00000487091 M0R296 226 aa20.94■□□□□ 0.94
CLIP2-206ENST00000487091 PAPLNO95428 1278 aa20.94■□□□□ 0.94
CLIP2-206ENST00000487091 BRD1O95696 1058 aa20.94■□□□□ 0.94
CLIP2-206ENST00000487091 MCF2P10911 925 aa20.94■□□□□ 0.94
CLIP2-206ENST00000487091 PLA2G5P39877 138 aa20.94■□□□□ 0.94
CLIP2-206ENST00000487091 YARSP54577 528 aaKnown RBP20.94■□□□□ 0.94
CLIP2-206ENST00000487091 SIGLEC14Q08ET2 396 aa20.94■□□□□ 0.94
CLIP2-206ENST00000487091 RAD51AP2Q09MP3 1159 aa20.94■□□□□ 0.94
CLIP2-206ENST00000487091 SF3A1Q15459 793 aaKnown RBP20.94■□□□□ 0.94
CLIP2-206ENST00000487091 XKR4Q5GH76 650 aa20.94■□□□□ 0.94
CLIP2-206ENST00000487091 MPZL3Q6UWV2 235 aa20.94■□□□□ 0.94
CLIP2-206ENST00000487091 ALKAL1Q6UXT8 129 aa20.94■□□□□ 0.94
CLIP2-206ENST00000487091 TDRD5Q8NAT2 981 aaKnown RBP20.94■□□□□ 0.94
CLIP2-206ENST00000487091 TMEM161BQ8NDZ6 487 aa20.94■□□□□ 0.94
CLIP2-206ENST00000487091 TTPALQ9BTX7 342 aa20.94■□□□□ 0.94
CLIP2-206ENST00000487091 LARSQ9P2J5 1176 aaKnown RBP20.94■□□□□ 0.94
CLIP2-206ENST00000487091 DENND4AQ7Z401 1863 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 VPS37CA5D8V6 355 aaPredicted RBP20.93■□□□□ 0.94
CLIP2-206ENST00000487091 ABLIM1O14639 778 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 STRN3Q13033 797 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 ARSHQ5FYA8 562 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 RTP2Q5QGT7 225 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 LILRA6Q6PI73 481 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 CCDC149Q6ZUS6 474 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 CEP120Q8N960 986 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 HASPINQ8TF76 798 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 PIK3R5Q8WYR1 880 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 KCNN1Q92952 543 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 FAM122AQ96E09 287 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 INTS4Q96HW7 963 aaKnown RBP20.93■□□□□ 0.94
CLIP2-206ENST00000487091 UROC1Q96N76 676 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 TCHPQ9BT92 498 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 KCNH6Q9H252 994 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 ODF2LQ9ULJ1 636 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 C2orf16Q68DN1 1984 aa20.93■□□□□ 0.94
CLIP2-206ENST00000487091 ZNF318Q5VUA4 2279 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 SMIM28A0A1B0GU29 152 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 CCDC195A0A1B0GUA6 201 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 H0YCG3 227 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 TGM5O43548 720 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 TOM1L1O75674 476 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 MAPTP10636 758 aaKnown RBP20.92■□□□□ 0.94
CLIP2-206ENST00000487091 GLRA4Q5JXX5 417 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 FAM171A1Q5VUB5 890 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 PDXDC1Q6P996 788 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 DCLRE1AQ6PJP8 1040 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 ZPBP2Q6X784 338 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 ZBTB33Q86T24 672 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 PALB2Q86YC2 1186 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 FEZF2Q8TBJ5 459 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 ACSF2Q96CM8 615 aaPredicted RBP20.92■□□□□ 0.94
CLIP2-206ENST00000487091 ACAP3Q96P50 834 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 SORCS3Q9UPU3 1222 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 CITO14578 2027 aa20.92■□□□□ 0.94
CLIP2-206ENST00000487091 B3GAT3O94766 335 aa20.91■□□□□ 0.94
CLIP2-206ENST00000487091 SCP2P22307 547 aa20.91■□□□□ 0.94
CLIP2-206ENST00000487091 GRIN1Q05586 938 aa20.91■□□□□ 0.94
CLIP2-206ENST00000487091 PRSS55Q6UWB4 352 aaPredicted RBP20.91■□□□□ 0.94
CLIP2-206ENST00000487091 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.91■□□□□ 0.94
CLIP2-206ENST00000487091 OTOP3Q7RTS5 596 aa20.91■□□□□ 0.94
CLIP2-206ENST00000487091 UBALD2Q8IYN6 164 aa20.91■□□□□ 0.94
CLIP2-206ENST00000487091 KREMEN2Q8NCW0 462 aa20.91■□□□□ 0.94
CLIP2-206ENST00000487091 LNX1Q8TBB1 728 aaPredicted RBP20.91■□□□□ 0.94
CLIP2-206ENST00000487091 PBXIP1Q96AQ6 731 aa20.91■□□□□ 0.94
CLIP2-206ENST00000487091 DDX27Q96GQ7 796 aaKnown RBP20.91■□□□□ 0.94
CLIP2-206ENST00000487091 CCSER1Q9C0I3 900 aa20.91■□□□□ 0.94
CLIP2-206ENST00000487091 BLOC1S4Q9NUP1 217 aa20.91■□□□□ 0.94
CLIP2-206ENST00000487091 SLC38A7Q9NVC3 462 aa20.91■□□□□ 0.94
CLIP2-206ENST00000487091 ZDHHC7Q9NXF8 308 aa20.91■□□□□ 0.94
CLIP2-206ENST00000487091 NPHP3-ACAD11A0A0J9YXS1 232 aa20.9■□□□□ 0.94
CLIP2-206ENST00000487091 KCNE1P15382 129 aa20.9■□□□□ 0.94
CLIP2-206ENST00000487091 RPL17P18621 184 aaKnown RBP20.9■□□□□ 0.94
CLIP2-206ENST00000487091 SYT1P21579 422 aa20.9■□□□□ 0.94
CLIP2-206ENST00000487091 CLCNKBP51801 687 aa20.9■□□□□ 0.94
CLIP2-206ENST00000487091 NCKAP1LP55160 1127 aa20.9■□□□□ 0.94
CLIP2-206ENST00000487091 OSTNP61366 133 aa20.9■□□□□ 0.94
CLIP2-206ENST00000487091 MTMR3Q13615 1198 aa20.9■□□□□ 0.94
CLIP2-206ENST00000487091 PSMD5Q16401 504 aa20.9■□□□□ 0.94
CLIP2-206ENST00000487091 UPP1Q16831 310 aa20.9■□□□□ 0.94
CLIP2-206ENST00000487091 CEP57Q86XR8 500 aa20.9■□□□□ 0.94
CLIP2-206ENST00000487091 ASIC4Q96FT7 647 aa20.9■□□□□ 0.94
CLIP2-206ENST00000487091 ZBTB45Q96K62 511 aaPredicted RBP20.9■□□□□ 0.94
CLIP2-206ENST00000487091 SNX27Q96L92 541 aa20.9■□□□□ 0.94
CLIP2-206ENST00000487091 CLSTN3Q9BQT9 956 aa20.9■□□□□ 0.94
CLIP2-206ENST00000487091 LIMD1Q9UGP4 676 aa20.9■□□□□ 0.94
CLIP2-206ENST00000487091 MUC6Q6W4X9 2439 aa20.89■□□□□ 0.94
CLIP2-206ENST00000487091 VWA8A3KMH1 1905 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 TRAPPC3O43617 180 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 RFPL2O75678 378 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 SPATA31D3P0C874 917 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 PLCG1P19174 1290 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 FGFR3P22607 806 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 NOLC1Q14978 699 aaKnown RBP eCLIP20.89■□□□□ 0.93
CLIP2-206ENST00000487091 KARSQ15046 597 aaKnown RBP20.89■□□□□ 0.93
CLIP2-206ENST00000487091 PTPAQ15257 358 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 CD300LGQ6UXG3 332 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 SPATA31D4Q6ZUB0 917 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms