RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 NUP62CLQ9H1M0 184 aa4.94□□□□□ -1.62
PTCD3-216ENST00000487043 KCND1Q9NSA2 647 aa4.94□□□□□ -1.62
PTCD3-216ENST00000487043 STAP2Q9UGK3 403 aa4.94□□□□□ -1.62
PTCD3-216ENST00000487043 CDC42EP3Q9UKI2 254 aa4.94□□□□□ -1.62
PTCD3-216ENST00000487043 HFM1A2PYH4 1435 aa4.94□□□□□ -1.62
PTCD3-216ENST00000487043 AKNAQ7Z591 1439 aa4.94□□□□□ -1.62
PTCD3-216ENST00000487043 ARHGEF5Q12774 1597 aa4.94□□□□□ -1.62
PTCD3-216ENST00000487043 SAMD9LQ8IVG5 1584 aa4.94□□□□□ -1.62
PTCD3-216ENST00000487043 RAB3GAP2Q9H2M9 1393 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 H3BUI4 141 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 N4BP3O15049 544 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 SLC16A6O15403 523 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 LY86O95711 162 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 ATF2P15336 505 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 FBLN1P23142 703 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 CTSSP25774 331 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 PIK3CBP42338 1070 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 IL12RB1P42701 662 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 AFF3P51826 1226 aaKnown RBP4.93□□□□□ -1.62
PTCD3-216ENST00000487043 ITGA1P56199 1179 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 RAB1AP62820 205 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 NAIPQ13075 1403 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 ADAM9Q13443 819 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 NCOA1Q15788 1441 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 INO80DQ53TQ3 878 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-216ENST00000487043 HSP90AB4PQ58FF6 505 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 ERICH6BQ5W0A0 696 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 ANO1Q5XXA6 986 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 ERAP2Q6P179 960 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 ABHD15Q6UXT9 468 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 CXXC5Q7LFL8 322 aaKnown RBP4.93□□□□□ -1.62
PTCD3-216ENST00000487043 SH2D3CQ8N5H7 860 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 C3orf20Q8ND61 904 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 PLBD2Q8NHP8 589 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.93□□□□□ -1.62
PTCD3-216ENST00000487043 NSUN6Q8TEA1 469 aaKnown RBP4.93□□□□□ -1.62
PTCD3-216ENST00000487043 EVI5LQ96CN4 794 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 WDR92Q96MX6 357 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 CLIC6Q96NY7 704 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 GORASP1Q9BQQ3 440 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 RSAD1Q9HA92 442 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 RRP7BPQ9NSQ0 103 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 TDP1Q9NUW8 608 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-216ENST00000487043 PCDHA3Q9Y5H8 950 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 FANCAO15360 1455 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 CCDC141Q6ZP82 1450 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 RPTORQ8N122 1335 aa4.93□□□□□ -1.62
PTCD3-216ENST00000487043 ARHGEF12Q9NZN5 1544 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 ANKRD30AQ9BXX3 1397 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 A0A088AWK7 358 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 A0A0G2JNJ9 132 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 ABHD14A-ACY1A0A1B0GW23 586 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 A0A1W2PR48 441 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 CCDC189A1A4V9 331 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 RHPN2P1A8MT19 583 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 F5H423 210 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-216ENST00000487043 MAFO75444 373 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-216ENST00000487043 FSBPO95073 299 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 LTA4HP09960 611 aaKnown RBP4.92□□□□□ -1.62
PTCD3-216ENST00000487043 PAX3P23760 479 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 TM4SF4P48230 202 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 PRIM2P49643 509 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 STAT5BP51692 787 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 HK3P52790 923 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 PER3P56645 1201 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 GPSM2P81274 684 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 NOGQ13253 232 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 FGL2Q14314 439 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 RTP5Q14D33 572 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 UBE3CQ15386 1083 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 TARBP2Q15633 366 aaKnown RBP4.92□□□□□ -1.62
PTCD3-216ENST00000487043 MAN2A1Q16706 1144 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 KHDC1Q4VXA5 237 aaKnown RBP4.92□□□□□ -1.62
PTCD3-216ENST00000487043 APOA5Q6Q788 366 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 PRRT2Q7Z6L0 340 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-216ENST00000487043 RSPH3Q86UC2 560 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 LDHDQ86WU2 507 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 BCL6BQ8N143 479 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-216ENST00000487043 PPP1R14CQ8TAE6 165 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 CCHCR1Q8TD31 782 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 SGCZQ96LD1 299 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 RIPOR3Q96MK2 946 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 VRK1Q99986 396 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-216ENST00000487043 C22orf23Q9BZE7 217 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 OSBPL6Q9BZF3 934 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 ZMAT3Q9HA38 289 aaKnown RBP4.92□□□□□ -1.62
PTCD3-216ENST00000487043 LMBRD1Q9NUN5 540 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 Q9UFV3 132 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 MBD1Q9UIS9 605 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-216ENST00000487043 TPCN1Q9ULQ1 816 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 CORO2BQ9UQ03 480 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 SNX13Q9Y5W8 968 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 ADGRL2O95490 1459 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 SHANK2Q9UPX8 1470 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 ABCC1P33527 1531 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 SYCP2Q9BX26 1530 aa4.92□□□□□ -1.62
PTCD3-216ENST00000487043 DIP2BQ9P265 1576 aa4.91□□□□□ -1.62
PTCD3-216ENST00000487043 RTEL1-TNFRSF6BF6WH68 1400 aa4.91□□□□□ -1.62
PTCD3-216ENST00000487043 SCAPERQ9BY12 1400 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms