RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 TOPORSQ9NS56 1045 aaPredicted RBP20.16■□□□□ 0.82
COL1A1-206ENST00000485870 ADAM28Q9UKQ2 775 aa20.16■□□□□ 0.82
COL1A1-206ENST00000485870 TBX20Q9UMR3 447 aa20.16■□□□□ 0.82
COL1A1-206ENST00000485870 CLDN3O15551 220 aa20.15■□□□□ 0.82
COL1A1-206ENST00000485870 CUTAO60888 179 aa20.15■□□□□ 0.82
COL1A1-206ENST00000485870 TADA2AO75478 443 aa20.15■□□□□ 0.82
COL1A1-206ENST00000485870 EFEMP2O95967 443 aa20.15■□□□□ 0.82
COL1A1-206ENST00000485870 SSTR3P32745 418 aaPredicted RBP20.15■□□□□ 0.82
COL1A1-206ENST00000485870 GLUD2P49448 558 aa20.15■□□□□ 0.82
COL1A1-206ENST00000485870 LIG4P49917 911 aa20.15■□□□□ 0.82
COL1A1-206ENST00000485870 DNM1Q05193 864 aaKnown RBP20.15■□□□□ 0.82
COL1A1-206ENST00000485870 SFR1Q86XK3 245 aa20.15■□□□□ 0.82
COL1A1-206ENST00000485870 RNF168Q8IYW5 571 aaPredicted RBP20.15■□□□□ 0.82
COL1A1-206ENST00000485870 B3GALT6Q96L58 329 aa20.15■□□□□ 0.82
COL1A1-206ENST00000485870 KLHL5Q96PQ7 755 aa20.15■□□□□ 0.82
COL1A1-206ENST00000485870 PPP1R10Q96QC0 940 aaKnown RBP20.15■□□□□ 0.82
COL1A1-206ENST00000485870 FIZ1Q96SL8 496 aa20.15■□□□□ 0.82
COL1A1-206ENST00000485870 EMILIN2Q9BXX0 1053 aa20.15■□□□□ 0.82
COL1A1-206ENST00000485870 USP15Q9Y4E8 981 aaPredicted RBP20.15■□□□□ 0.82
COL1A1-206ENST00000485870 SMIM28A0A1B0GU29 152 aa20.14■□□□□ 0.81
COL1A1-206ENST00000485870 HNRNPDLO14979 420 aaKnown RBP20.14■□□□□ 0.81
COL1A1-206ENST00000485870 KIF4AO95239 1232 aa20.14■□□□□ 0.81
COL1A1-206ENST00000485870 CNPP09543 421 aaKnown RBP20.14■□□□□ 0.81
COL1A1-206ENST00000485870 EPCAMP16422 314 aa20.14■□□□□ 0.81
COL1A1-206ENST00000485870 KLRC2P26717 231 aa20.14■□□□□ 0.81
COL1A1-206ENST00000485870 ZP2Q05996 745 aa20.14■□□□□ 0.81
COL1A1-206ENST00000485870 MCL1Q07820 350 aa20.14■□□□□ 0.81
COL1A1-206ENST00000485870 KIAA1841Q6NSI8 718 aa20.14■□□□□ 0.81
COL1A1-206ENST00000485870 SYCE2Q6PIF2 218 aa20.14■□□□□ 0.81
COL1A1-206ENST00000485870 GJD3Q8N144 294 aa20.14■□□□□ 0.81
COL1A1-206ENST00000485870 KCNG4Q8TDN1 519 aa20.14■□□□□ 0.81
COL1A1-206ENST00000485870 KCNN1Q92952 543 aa20.14■□□□□ 0.81
COL1A1-206ENST00000485870 SNX27Q96L92 541 aa20.14■□□□□ 0.81
COL1A1-206ENST00000485870 HAPLN2Q9GZV7 340 aa20.14■□□□□ 0.81
COL1A1-206ENST00000485870 GOLGA2P5Q9HBQ8 144 aa20.14■□□□□ 0.81
COL1A1-206ENST00000485870 SF3B1O75533 1304 aaKnown RBP eCLIP20.13■□□□□ 0.81
COL1A1-206ENST00000485870 LILRB3O75022 631 aa20.13■□□□□ 0.81
COL1A1-206ENST00000485870 SCP2P22307 547 aa20.13■□□□□ 0.81
COL1A1-206ENST00000485870 DSG1Q02413 1049 aa20.13■□□□□ 0.81
COL1A1-206ENST00000485870 ZC2HC1CQ53FD0 456 aaPredicted RBP20.13■□□□□ 0.81
COL1A1-206ENST00000485870 KIAA0319Q5VV43 1072 aa20.13■□□□□ 0.81
COL1A1-206ENST00000485870 SHC4Q6S5L8 630 aa20.13■□□□□ 0.81
COL1A1-206ENST00000485870 ALKAL1Q6UXT8 129 aa20.13■□□□□ 0.81
COL1A1-206ENST00000485870 ADHFE1Q8IWW8 467 aa20.13■□□□□ 0.81
COL1A1-206ENST00000485870 SLC22A17Q8WUG5 538 aa20.13■□□□□ 0.81
COL1A1-206ENST00000485870 DNAJC19Q96DA6 116 aa20.13■□□□□ 0.81
COL1A1-206ENST00000485870 PRKAG3Q9UGI9 489 aa20.13■□□□□ 0.81
COL1A1-206ENST00000485870 SSX2IPQ9Y2D8 614 aa20.13■□□□□ 0.81
COL1A1-206ENST00000485870 MEFVO15553 781 aaPredicted RBP20.12■□□□□ 0.81
COL1A1-206ENST00000485870 IDEP14735 1019 aa20.12■□□□□ 0.81
COL1A1-206ENST00000485870 HOXB8P17481 243 aaPredicted RBP20.12■□□□□ 0.81
COL1A1-206ENST00000485870 ME1P48163 572 aa20.12■□□□□ 0.81
COL1A1-206ENST00000485870 GTF2BQ00403 316 aa20.12■□□□□ 0.81
COL1A1-206ENST00000485870 USP41Q3LFD5 358 aa20.12■□□□□ 0.81
COL1A1-206ENST00000485870 TPRNQ4KMQ1 711 aa20.12■□□□□ 0.81
COL1A1-206ENST00000485870 XKR4Q5GH76 650 aa20.12■□□□□ 0.81
COL1A1-206ENST00000485870 AXDND1Q5T1B0 1012 aaPredicted RBP20.12■□□□□ 0.81
COL1A1-206ENST00000485870 ATL3Q6DD88 541 aa20.12■□□□□ 0.81
COL1A1-206ENST00000485870 PPFIBP1Q86W92 1011 aa20.12■□□□□ 0.81
COL1A1-206ENST00000485870 RIN2Q8WYP3 895 aaPredicted RBP20.12■□□□□ 0.81
COL1A1-206ENST00000485870 STAMQ92783 540 aa20.12■□□□□ 0.81
COL1A1-206ENST00000485870 DHX58Q96C10 678 aa20.12■□□□□ 0.81
COL1A1-206ENST00000485870 ZMAT2Q96NC0 199 aaKnown RBP20.12■□□□□ 0.81
COL1A1-206ENST00000485870 S1PR5Q9H228 398 aa20.12■□□□□ 0.81
COL1A1-206ENST00000485870 CHST7Q9NS84 486 aa20.12■□□□□ 0.81
COL1A1-206ENST00000485870 TBC1D7Q9P0N9 293 aa20.12■□□□□ 0.81
COL1A1-206ENST00000485870 CFAP45Q9UL16 551 aa20.12■□□□□ 0.81
COL1A1-206ENST00000485870 TEX28O15482 410 aa20.11■□□□□ 0.81
COL1A1-206ENST00000485870 PIGRP01833 764 aa20.11■□□□□ 0.81
COL1A1-206ENST00000485870 CXCL8P10145 99 aa20.11■□□□□ 0.81
COL1A1-206ENST00000485870 GAP43P17677 238 aa20.11■□□□□ 0.81
COL1A1-206ENST00000485870 ABCD1P33897 745 aa20.11■□□□□ 0.81
COL1A1-206ENST00000485870 CLCN4P51793 760 aa20.11■□□□□ 0.81
COL1A1-206ENST00000485870 CLCNKBP51801 687 aa20.11■□□□□ 0.81
COL1A1-206ENST00000485870 SOX4Q06945 474 aaPredicted RBP20.11■□□□□ 0.81
COL1A1-206ENST00000485870 MAP4K3Q8IVH8 894 aa20.11■□□□□ 0.81
COL1A1-206ENST00000485870 C12orf76Q8N812 135 aaPredicted RBP20.11■□□□□ 0.81
COL1A1-206ENST00000485870 UROC1Q96N76 676 aa20.11■□□□□ 0.81
COL1A1-206ENST00000485870 MRPL44Q9H9J2 332 aaKnown RBP20.11■□□□□ 0.81
COL1A1-206ENST00000485870 DZANK1Q9NVP4 752 aa20.11■□□□□ 0.81
COL1A1-206ENST00000485870 CNTN3Q9P232 1028 aa20.11■□□□□ 0.81
COL1A1-206ENST00000485870 SEL1LQ9UBV2 794 aa20.11■□□□□ 0.81
COL1A1-206ENST00000485870 CDH22Q9UJ99 828 aa20.11■□□□□ 0.81
COL1A1-206ENST00000485870 PCDHA7Q9UN72 937 aa20.11■□□□□ 0.81
COL1A1-206ENST00000485870 ZDHHC9Q9Y397 364 aa20.11■□□□□ 0.81
COL1A1-206ENST00000485870 SPDYE4A6NLX3 237 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 B3GAT3O94766 335 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 ADH1AP07327 375 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 KCNE1P15382 129 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 IGFBP6P24592 240 aaPredicted RBP20.1■□□□□ 0.81
COL1A1-206ENST00000485870 TNFSF9P41273 254 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 E2F4Q16254 413 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 SLC10A6Q3KNW5 377 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 RTP2Q5QGT7 225 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 RARS2Q5T160 578 aaKnown RBP20.1■□□□□ 0.81
COL1A1-206ENST00000485870 FAM171A1Q5VUB5 890 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 KANK3Q6NY19 840 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 SLC39A4Q6P5W5 647 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 ZNF720Q7Z2F6 126 aa20.1■□□□□ 0.81
COL1A1-206ENST00000485870 CEP57Q86XR8 500 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms