RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 KIF1BPQ96EK5 621 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 NEK1Q96PY6 1258 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 EMILIN2Q9BXX0 1053 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 MFSD1Q9H3U5 465 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 TLE6Q9H808 572 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 IL17RBQ9NRM6 502 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 VAV3Q9UKW4 847 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 PNMA2Q9UL42 364 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 FSD2A1L4K1 749 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 C2CD4DB7Z1M9 353 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 PPFIA4O75335 1185 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 SMIM10L2AP0DMW4 78 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 SMIM10L2BP0DMW5 78 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 AOC1P19801 751 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 MAPK1P28482 360 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 NOVP48745 357 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 PRKCQQ04759 706 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 KCNC3Q14003 757 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 STXBP2Q15833 593 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 IFI16Q16666 785 aaKnown RBP7.68□□□□□ -1.18
SMC4-217ENST00000485867 DUSP6Q16828 381 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 HSDL1Q3SXM5 330 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 ZKSCAN2Q63HK3 967 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 SYCE2Q6PIF2 218 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 RGS22Q8NE09 1264 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 SYTL5Q8TDW5 730 aaPredicted RBP7.68□□□□□ -1.18
SMC4-217ENST00000485867 APPBP2Q92624 585 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 TAAR1Q96RJ0 339 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 CDCA3Q99618 268 aaPredicted RBP7.68□□□□□ -1.18
SMC4-217ENST00000485867 C16orf70Q9BSU1 422 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 SEMA4AQ9H3S1 761 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 COL20A1Q9P218 1284 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.68□□□□□ -1.18
SMC4-217ENST00000485867 NR2E1Q9Y466 385 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 MRVI1Q9Y6F6 885 aa7.68□□□□□ -1.18
SMC4-217ENST00000485867 FRMPD2Q68DX3 1309 aaPredicted RBP7.68□□□□□ -1.18
SMC4-217ENST00000485867 CNOT1A5YKK6 2376 aaKnown RBP7.68□□□□□ -1.18
SMC4-217ENST00000485867 TSPY2A6NKD2 308 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 ENPP3O14638 875 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 ENC1O14682 589 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 PI15O43692 258 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 APPP05067 770 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 CEACAM5P06731 702 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 ASGR2P07307 311 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 GHRP10912 638 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 GNAT2P19087 354 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 BMP6P22004 513 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 NTF4P34130 210 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 CD96P40200 585 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 TECP42680 631 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 ANKRD54Q6NXT1 300 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 TMEM184AQ6ZMB5 413 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 ITPRIPQ8IWB1 547 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 IFNL3Q8IZI9 196 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 TOP6BLQ8N6T0 577 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 DTWD2Q8NBA8 298 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 CYP2W1Q8TAV3 490 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 NSUN6Q8TEA1 469 aaKnown RBP7.67□□□□□ -1.18
SMC4-217ENST00000485867 LINC01599Q8WXQ3 324 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 TBC1D5Q92609 795 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 SPATA33Q96N06 139 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 IWS1Q96ST2 819 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 RMDN3Q96TC7 470 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 APOL5Q9BWW9 433 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 BCL11AQ9H165 835 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 RNPEPQ9H4A4 650 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 POMKQ9H5K3 350 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 EHMT1Q9H9B1 1298 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 CDH22Q9UJ99 828 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 ADAMTS6Q9UKP5 1117 aa7.67□□□□□ -1.18
SMC4-217ENST00000485867 ARID1BQ8NFD5 2236 aaPredicted RBP7.66□□□□□ -1.18
SMC4-217ENST00000485867 M0R2C6 588 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 SORBS3O60504 671 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 PAGE1O75459 146 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 EIF3JO75822 258 aaKnown RBP7.66□□□□□ -1.18
SMC4-217ENST00000485867 GGPS1O95749 300 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 CHRNA1P02708 482 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 LGALS2P05162 132 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 SLC3A2P08195 630 aaKnown RBP7.66□□□□□ -1.18
SMC4-217ENST00000485867 SRGAP2BP0DMP2 458 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 RLBP1P12271 317 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 GSTT1P30711 240 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 ADAM17P78536 824 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 UBE3AQ05086 875 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 PPARAQ07869 468 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 MGAT3Q09327 533 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 COL9A2Q14055 689 aaPredicted RBP7.66□□□□□ -1.18
SMC4-217ENST00000485867 LPIN1Q14693 890 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 USH1GQ495M9 461 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 PAN2Q504Q3 1202 aaKnown RBP7.66□□□□□ -1.18
SMC4-217ENST00000485867 CELF3Q5SZQ8 465 aaKnown RBP7.66□□□□□ -1.18
SMC4-217ENST00000485867 FAM214BQ7L5A3 538 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 GRIN3AQ8TCU5 1115 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 MICAL1Q8TDZ2 1067 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 FBF1Q8TES7 1133 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 RUBCNQ92622 972 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 HEXIM2Q96MH2 286 aaKnown RBP7.66□□□□□ -1.18
SMC4-217ENST00000485867 MAF1Q9H063 256 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 TNKS2Q9H2K2 1166 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 CBX8Q9HC52 389 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms