RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 CCDC6Q16204 474 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 UBXN11Q5T124 520 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 PSAPL1Q6NUJ1 521 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 PRSS55Q6UWB4 352 aaPredicted RBP13.57□□□□□ -0.24
SSR4-210ENST00000485612 FAM3CQ92520 227 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 MCRS1Q96EZ8 462 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 NLRP4Q96MN2 994 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 GAD1Q99259 594 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 ARRDC1-AS1Q9H2J1 176 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 BMP2KQ9NSY1 1161 aaPredicted RBP13.57□□□□□ -0.24
SSR4-210ENST00000485612 MIOSQ9NXC5 875 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 DDX25Q9UHL0 483 aaKnown RBP13.57□□□□□ -0.24
SSR4-210ENST00000485612 VAV3Q9UKW4 847 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 KCNH3Q9ULD8 1083 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 CPLX1O14810 134 aa13.56□□□□□ -0.24
SSR4-210ENST00000485612 HOXA9P31269 272 aa13.56□□□□□ -0.24
SSR4-210ENST00000485612 FOXC1Q12948 553 aa13.56□□□□□ -0.24
SSR4-210ENST00000485612 PABPC1LQ4VXU2 614 aaKnown RBP13.56□□□□□ -0.24
SSR4-210ENST00000485612 HEATR6Q6AI08 1181 aaKnown RBP13.56□□□□□ -0.24
SSR4-210ENST00000485612 TANGO2Q6ICL3 276 aa13.56□□□□□ -0.24
SSR4-210ENST00000485612 MOXD1Q6UVY6 613 aa13.56□□□□□ -0.24
SSR4-210ENST00000485612 SMG8Q8ND04 991 aaKnown RBP13.56□□□□□ -0.24
SSR4-210ENST00000485612 CNNM3Q8NE01 707 aa13.56□□□□□ -0.24
SSR4-210ENST00000485612 ING5Q8WYH8 240 aa13.56□□□□□ -0.24
SSR4-210ENST00000485612 ZNF274Q96GC6 653 aaPredicted RBP13.56□□□□□ -0.24
SSR4-210ENST00000485612 TMEM121BQ9BXQ6 578 aaPredicted RBP13.56□□□□□ -0.24
SSR4-210ENST00000485612 C22orf23Q9BZE7 217 aa13.56□□□□□ -0.24
SSR4-210ENST00000485612 BRD9Q9H8M2 597 aa13.56□□□□□ -0.24
SSR4-210ENST00000485612 MINDY3Q9H8M7 445 aa13.56□□□□□ -0.24
SSR4-210ENST00000485612 IFT122Q9HBG6 1241 aa13.56□□□□□ -0.24
SSR4-210ENST00000485612 HCFC1R1Q9NWW0 138 aa13.56□□□□□ -0.24
SSR4-210ENST00000485612 DNMT3BQ9UBC3 853 aaKnown RBP13.56□□□□□ -0.24
SSR4-210ENST00000485612 MRPS23Q9Y3D9 190 aaKnown RBP13.56□□□□□ -0.24
SSR4-210ENST00000485612 CYP46A1Q9Y6A2 500 aa13.56□□□□□ -0.24
SSR4-210ENST00000485612 RALGAPA1Q6GYQ0 2036 aa13.56□□□□□ -0.24
SSR4-210ENST00000485612 ANKRD11Q6UB99 2663 aaPredicted RBP13.55□□□□□ -0.24
SSR4-210ENST00000485612 FAM205CA6NFA0 338 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 SPINK2P20155 84 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 HOXA11P31270 313 aaPredicted RBP13.55□□□□□ -0.24
SSR4-210ENST00000485612 SCNN1GP51170 649 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 PSMC5P62195 406 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 RTP2Q5QGT7 225 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 KRT25Q7Z3Z0 450 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 SPEM1Q8N4L4 309 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 OXER1Q8TDS5 423 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 TMEM143Q96AN5 459 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 ELSPBP1Q96BH3 223 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 ADAM33Q9BZ11 813 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 RNF39Q9H2S5 420 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 KCNMB3Q9NPA1 279 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 GDE1Q9NZC3 331 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 ADAM28Q9UKQ2 775 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 COL4A3BPQ9Y5P4 624 aa13.55□□□□□ -0.24
SSR4-210ENST00000485612 ZBTB39O15060 712 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 TADA2AO75478 443 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 POU2F2P09086 479 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 CHRNB1P11230 501 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 MLH1P40692 756 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 SCRN1Q12765 414 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 PPP2R5CQ13362 524 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 GAS6Q14393 721 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 GRM2Q14416 872 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 UVSSAQ2YD98 709 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 EARS2Q5JPH6 523 aaKnown RBP13.54□□□□□ -0.24
SSR4-210ENST00000485612 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 SLC7A14Q8TBB6 771 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 ZFP42Q96MM3 310 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 CLSTN3Q9BQT9 956 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 TRMT61BQ9BVS5 477 aaKnown RBP13.54□□□□□ -0.24
SSR4-210ENST00000485612 WASF3Q9UPY6 502 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 IPPQ9Y573 584 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 MYH11P35749 1972 aa13.54□□□□□ -0.24
SSR4-210ENST00000485612 CNOT1A5YKK6 2376 aaKnown RBP13.53□□□□□ -0.24
SSR4-210ENST00000485612 K7ESF4 209 aa13.53□□□□□ -0.24
SSR4-210ENST00000485612 TAF4O00268 1085 aa13.53□□□□□ -0.24
SSR4-210ENST00000485612 SRGAP2CP0DJJ0 459 aa13.53□□□□□ -0.24
SSR4-210ENST00000485612 QARSP47897 775 aaKnown RBP13.53□□□□□ -0.24
SSR4-210ENST00000485612 NOVA1P51513 510 aaKnown RBP13.53□□□□□ -0.24
SSR4-210ENST00000485612 AXDND1Q5T1B0 1012 aaPredicted RBP13.53□□□□□ -0.24
SSR4-210ENST00000485612 RNF43Q68DV7 783 aa13.53□□□□□ -0.24
SSR4-210ENST00000485612 POTEHQ6S545 545 aa13.53□□□□□ -0.24
SSR4-210ENST00000485612 SRGAP1Q7Z6B7 1085 aa13.53□□□□□ -0.24
SSR4-210ENST00000485612 PRPF31Q8WWY3 499 aaKnown RBP13.53□□□□□ -0.24
SSR4-210ENST00000485612 RABGGTAQ92696 567 aa13.53□□□□□ -0.24
SSR4-210ENST00000485612 HAS1Q92839 578 aa13.53□□□□□ -0.24
SSR4-210ENST00000485612 GATA6Q92908 595 aa13.53□□□□□ -0.24
SSR4-210ENST00000485612 IRF7Q92985 503 aa13.53□□□□□ -0.24
SSR4-210ENST00000485612 LOXL4Q96JB6 756 aa13.53□□□□□ -0.24
SSR4-210ENST00000485612 TM6SF1Q9BZW5 370 aa13.53□□□□□ -0.24
SSR4-210ENST00000485612 SLKQ9H2G2 1235 aaPredicted RBP13.53□□□□□ -0.24
SSR4-210ENST00000485612 DHX33Q9H6R0 707 aaKnown RBP13.53□□□□□ -0.24
SSR4-210ENST00000485612 PDRG1Q9NUG6 133 aa13.53□□□□□ -0.24
SSR4-210ENST00000485612 RGL1Q9NZL6 768 aa13.53□□□□□ -0.24
SSR4-210ENST00000485612 PIAS3Q9Y6X2 628 aa13.53□□□□□ -0.24
SSR4-210ENST00000485612 CITO14578 2027 aa13.52□□□□□ -0.24
SSR4-210ENST00000485612 NOTCH4Q99466 2003 aa13.52□□□□□ -0.24
SSR4-210ENST00000485612 WDFY3Q8IZQ1 3526 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 CCDC194A0A1B0GVG4 234 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 GIPC1O14908 333 aa13.52□□□□□ -0.25
SSR4-210ENST00000485612 PAPSS2O95340 614 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms