RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 FAM171A2A8MVW0 826 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 ZNF185O15231 689 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 FOXN1O15353 648 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 NCR1O76036 304 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 RAP2AP10114 183 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 GUCY1A2P33402 732 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 SMN1Q16637 294 aaKnown RBP4.46□□□□□ -1.7
SFPQ-209ENST00000485454 PDCD4Q53EL6 469 aaKnown RBP4.46□□□□□ -1.7
SFPQ-209ENST00000485454 FAM102AQ5T9C2 384 aaPredicted RBP4.46□□□□□ -1.7
SFPQ-209ENST00000485454 AFMIDQ63HM1 303 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 METRNLQ641Q3 311 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 LAIR1Q6GTX8 287 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 CASKIN2Q8WXE0 1202 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 SSH1Q8WYL5 1049 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 SLC2A13Q96QE2 648 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 TTPALQ9BTX7 342 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 TMEM140Q9NV12 185 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 DNM3Q9UQ16 869 aa4.46□□□□□ -1.7
SFPQ-209ENST00000485454 CENPVL1A0A0U1RR11 272 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 WNT10BO00744 389 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 NDUFA10O95299 355 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 ATP5JP18859 108 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 BMPR1AP36894 532 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 CHN2P52757 468 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 INHBEP58166 350 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 RAP2BP61225 183 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 KRTAP1-1Q07627 177 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 SEPT2Q15019 361 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 CLUL1Q15846 466 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 BEAN1Q3B7T3 259 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 INAVAQ3KP66 663 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 DRC7Q8IY82 874 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.45□□□□□ -1.7
SFPQ-209ENST00000485454 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.45□□□□□ -1.7
SFPQ-209ENST00000485454 STON2Q8WXE9 905 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 CYFIP2Q96F07 1278 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 MRI1Q9BV20 369 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 TEX101Q9BY14 249 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 LDAHQ9H6V9 325 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 AJAP1Q9UKB5 411 aaPredicted RBP4.45□□□□□ -1.7
SFPQ-209ENST00000485454 SIK3Q9Y2K2 1263 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 USP15Q9Y4E8 981 aaPredicted RBP4.45□□□□□ -1.7
SFPQ-209ENST00000485454 DMRT1Q9Y5R6 373 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 PNPLA7Q6ZV29 1317 aa4.45□□□□□ -1.7
SFPQ-209ENST00000485454 TEX33O43247 280 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 LPXNO60711 386 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 POMCP01189 267 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 HLA-DOAP06340 250 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 ALDH1A3P47895 512 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 SLC6A9P48067 706 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 FSTL1Q12841 308 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 AGAP9Q5VTM2 703 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 OTUD7BQ6GQQ9 843 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 PGM2L1Q6PCE3 622 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 PCSK4Q6UW60 755 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 MED25Q71SY5 747 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 ARHGEF19Q8IW93 802 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 RHOT2Q8IXI1 618 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 C1orf162Q8NEQ5 155 aaPredicted RBP4.44□□□□□ -1.7
SFPQ-209ENST00000485454 OR2I1PQ8NGU4 316 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 PHACTR3Q96KR7 559 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 NEU1Q99519 415 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 MANSC1Q9H8J5 431 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 MKS1Q9NXB0 559 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 FAM30AQ9NZY2 134 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 DKK2Q9UBU2 259 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 ATP11BQ9Y2G3 1177 aa4.44□□□□□ -1.7
SFPQ-209ENST00000485454 COL4A3Q01955 1670 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 B3GALT2O43825 422 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 GPR32O75388 356 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 GCP02774 474 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 CDK11BP21127 795 aaKnown RBP4.43□□□□□ -1.7
SFPQ-209ENST00000485454 FPR1P21462 350 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 IARSP41252 1262 aaKnown RBP4.43□□□□□ -1.7
SFPQ-209ENST00000485454 GUCY2FP51841 1108 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 SEM1Q6ZVN7 128 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 VRK3Q8IV63 474 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 CBARPQ8N350 705 aaPredicted RBP4.43□□□□□ -1.7
SFPQ-209ENST00000485454 PPM1NQ8N819 430 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 CPEB3Q8NE35 698 aaKnown RBP4.43□□□□□ -1.7
SFPQ-209ENST00000485454 CCHCR1Q8TD31 782 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 NRG4Q8WWG1 115 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 FUBP3Q96I24 572 aaKnown RBP eCLIP4.43□□□□□ -1.7
SFPQ-209ENST00000485454 AGAP2Q99490 1192 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 C7orf25Q9BPX7 421 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 REXO4Q9GZR2 422 aaKnown RBP4.43□□□□□ -1.7
SFPQ-209ENST00000485454 SERHL2Q9H4I8 314 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 CYP4F11Q9HBI6 524 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 ANKFY1Q9P2R3 1169 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 ACTL7AQ9Y615 435 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 FPGT-TNNI3KV9GXZ4 949 aa4.43□□□□□ -1.7
SFPQ-209ENST00000485454 GRID2IPA4D2P6 1211 aa4.42□□□□□ -1.7
SFPQ-209ENST00000485454 RHOBTB3O94955 611 aa4.42□□□□□ -1.7
SFPQ-209ENST00000485454 MT-CO1P00395 513 aa4.42□□□□□ -1.7
SFPQ-209ENST00000485454 AMY1AP04745 511 aa4.42□□□□□ -1.7
SFPQ-209ENST00000485454 DDX6P26196 483 aaKnown RBP eCLIP4.42□□□□□ -1.7
SFPQ-209ENST00000485454 PCSK1P29120 753 aa4.42□□□□□ -1.7
SFPQ-209ENST00000485454 ZEB1P37275 1124 aaPredicted RBP4.42□□□□□ -1.7
SFPQ-209ENST00000485454 WASP42768 502 aa4.42□□□□□ -1.7
SFPQ-209ENST00000485454 CDKN1CP49918 316 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms