RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 NT5C1B-RDH14C9J2C7 533 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 FSCN2O14926 492 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 ZC3H11AO75152 810 aaKnown RBP eCLIP11.72□□□□□ -0.53
DDX56-212ENST00000485367 SASH3O75995 380 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 SERPINC1P01008 464 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 SSTR3P32745 418 aaPredicted RBP11.72□□□□□ -0.53
DDX56-212ENST00000485367 ACTN2P35609 894 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 FXR2P51116 673 aaKnown RBP eCLIP11.72□□□□□ -0.53
DDX56-212ENST00000485367 MBTD1Q05BQ5 628 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 POU5F1BQ06416 359 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 HAUS3Q68CZ6 603 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 PADI6Q6TGC4 694 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 MRPL10Q7Z7H8 261 aaKnown RBP11.72□□□□□ -0.53
DDX56-212ENST00000485367 SLC39A11Q8N1S5 342 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 MCPH1Q8NEM0 835 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 URGCPQ8TCY9 931 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 CPB2Q96IY4 423 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 NCAPGQ9BPX3 1015 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 FUT8Q9BYC5 575 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 GBP3Q9H0R5 595 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 CD320Q9NPF0 282 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 CD207Q9UJ71 328 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 LRRIQ4A6NIV6 560 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 MYO1CO00159 1063 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 AXLP30530 894 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 TNNT3P45378 269 aaPredicted RBP11.72□□□□□ -0.53
DDX56-212ENST00000485367 PCBP1Q15365 356 aaKnown RBP eCLIP11.72□□□□□ -0.53
DDX56-212ENST00000485367 NOTUMQ6P988 496 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 LEKR1Q6ZMV7 388 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 AGMOQ6ZNB7 445 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 TMC7Q7Z402 723 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 IFNLR1Q8IU57 520 aaPredicted RBP11.72□□□□□ -0.53
DDX56-212ENST00000485367 TMEM139Q8IV31 216 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 GJD3Q8N144 294 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 RSPH1Q8WYR4 309 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 TMEM169Q96HH4 297 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 EIF2AQ9BY44 585 aaKnown RBP11.72□□□□□ -0.53
DDX56-212ENST00000485367 HSD3B7Q9H2F3 369 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 NRDE2Q9H7Z3 1164 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 RSAD1Q9HA92 442 aa11.72□□□□□ -0.53
DDX56-212ENST00000485367 MUC3AQ02505 3323 aa11.71□□□□□ -0.53
DDX56-212ENST00000485367 HIDE1A8MVS5 230 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 MBTPS2O43462 519 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 PPP6R2O75170 966 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 ERLIN1O75477 346 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 SEC31AO94979 1220 aaKnown RBP11.71□□□□□ -0.54
DDX56-212ENST00000485367 ITGA4P13612 1032 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 CA8P35219 290 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 TBX2Q13207 712 aaPredicted RBP11.71□□□□□ -0.54
DDX56-212ENST00000485367 SMAD4Q13485 552 aaKnown RBP11.71□□□□□ -0.54
DDX56-212ENST00000485367 PDIA5Q14554 519 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 ECM1Q16610 540 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 DUSP6Q16828 381 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 SRLQ86TD4 932 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 ZNF280BQ86YH2 543 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 SMG8Q8ND04 991 aaKnown RBP11.71□□□□□ -0.54
DDX56-212ENST00000485367 CNNM3Q8NE01 707 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 CCDC51Q96ER9 411 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 BAG1Q99933 345 aaPredicted RBP11.71□□□□□ -0.54
DDX56-212ENST00000485367 APOL6Q9BWW8 343 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 PARD6BQ9BYG5 372 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 RAB34Q9BZG1 259 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 CSRNP2Q9H175 543 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 NGRNQ9NPE2 291 aaKnown RBP11.71□□□□□ -0.54
DDX56-212ENST00000485367 CLEC1BQ9P126 229 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 ADAM21Q9UKJ8 722 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 BARX2Q9UMQ3 279 aaPredicted RBP11.71□□□□□ -0.54
DDX56-212ENST00000485367 KIAA1024Q9UPX6 916 aa11.71□□□□□ -0.54
DDX56-212ENST00000485367 CNTNAP2Q9UHC6 1331 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 B4GALT5O43286 388 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 GLP2RO95838 553 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 POMCP01189 267 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 GALTP07902 379 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 PFKFB1P16118 471 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 ARF4P18085 180 aaPredicted RBP11.7□□□□□ -0.54
DDX56-212ENST00000485367 CYP11B2P19099 503 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 AFF1P51825 1210 aaKnown RBP11.7□□□□□ -0.54
DDX56-212ENST00000485367 GNG11P61952 73 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 SLC39A14Q15043 492 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 AMHR2Q16671 573 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 LONRF2Q1L5Z9 754 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 ICE2Q659A1 982 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 DTHD1Q6ZMT9 781 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 HDXQ7Z353 690 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 TMEM173Q86WV6 379 aaPredicted RBP11.7□□□□□ -0.54
DDX56-212ENST00000485367 CDR2LQ86X02 465 aaPredicted RBP11.7□□□□□ -0.54
DDX56-212ENST00000485367 CEP112Q8N8E3 955 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 SNX29Q8TEQ0 813 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 MSLNLQ96KJ4 702 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 FAM193BQ96PV7 902 aaPredicted RBP11.7□□□□□ -0.54
DDX56-212ENST00000485367 CDCA3Q99618 268 aaPredicted RBP11.7□□□□□ -0.54
DDX56-212ENST00000485367 NFKBIZQ9BYH8 718 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 TRIM6Q9C030 488 aaPredicted RBP11.7□□□□□ -0.54
DDX56-212ENST00000485367 EPHX3Q9H6B9 360 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 POLD4Q9HCU8 107 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 UBN1Q9NPG3 1134 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.7□□□□□ -0.54
DDX56-212ENST00000485367 DNAJB4Q9UDY4 337 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 HPSEQ9Y251 543 aa11.7□□□□□ -0.54
DDX56-212ENST00000485367 HES2Q9Y543 173 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms