RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 MDM1Q8TC05 714 aa21.08■□□□□ 0.97
LIMS2-215ENST00000484252 SH2D3AQ9BRG2 576 aa21.08■□□□□ 0.97
LIMS2-215ENST00000484252 WHRNQ9P202 907 aa21.08■□□□□ 0.97
LIMS2-215ENST00000484252 CCNE2O96020 404 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 MAN1A1P33908 653 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 RPS6P62753 249 aaKnown RBP21.08■□□□□ 0.96
LIMS2-215ENST00000484252 GCNT1Q02742 428 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 CYP24A1Q07973 514 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 TNFAIP8L3Q5GJ75 292 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 MFSD5Q6N075 450 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 OTUD6AQ7L8S5 288 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 AGBL3Q8NEM8 1001 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 TAS1R2Q8TE23 839 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 TRIM11Q96F44 468 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 BTBD6Q96KE9 485 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 SELENOSQ9BQE4 189 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 SENP7Q9BQF6 1050 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 PDCD2LQ9BRP1 358 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 CCDC134Q9H6E4 229 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 ACP6Q9NPH0 428 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 AVENQ9NQS1 362 aaPredicted RBP21.08■□□□□ 0.96
LIMS2-215ENST00000484252 GINM1Q9NU53 330 aa21.08■□□□□ 0.96
LIMS2-215ENST00000484252 RGPD3A6NKT7 1758 aaPredicted RBP21.07■□□□□ 0.96
LIMS2-215ENST00000484252 RGPD4Q7Z3J3 1758 aa21.07■□□□□ 0.96
LIMS2-215ENST00000484252 PHF20L1A8MW92 1017 aa21.07■□□□□ 0.96
LIMS2-215ENST00000484252 GRIN3BO60391 1043 aa21.07■□□□□ 0.96
LIMS2-215ENST00000484252 DKC1O60832 514 aaKnown RBP eCLIP21.07■□□□□ 0.96
LIMS2-215ENST00000484252 MYCLP12524 364 aaPredicted RBP21.07■□□□□ 0.96
LIMS2-215ENST00000484252 PSEN1P49768 467 aa21.07■□□□□ 0.96
LIMS2-215ENST00000484252 PPP1R7Q15435 360 aa21.07■□□□□ 0.96
LIMS2-215ENST00000484252 TAOK1Q7L7X3 1001 aa21.07■□□□□ 0.96
LIMS2-215ENST00000484252 ATXN2LQ8WWM7 1075 aaKnown RBP21.07■□□□□ 0.96
LIMS2-215ENST00000484252 ZNF317Q96PQ6 595 aaPredicted RBP21.07■□□□□ 0.96
LIMS2-215ENST00000484252 ADAM7Q9H2U9 754 aa21.07■□□□□ 0.96
LIMS2-215ENST00000484252 CXorf56Q9H5V9 222 aa21.07■□□□□ 0.96
LIMS2-215ENST00000484252 PXMP2Q9NR77 195 aa21.07■□□□□ 0.96
LIMS2-215ENST00000484252 ZBTB12Q9Y330 459 aaPredicted RBP21.07■□□□□ 0.96
LIMS2-215ENST00000484252 RASGRF2O14827 1237 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 ASAP2O43150 1006 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 ATP9AO75110 1047 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 MYBL1P10243 752 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 GHRP10912 638 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 MAP2K2P36507 400 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 RMDN3Q96TC7 470 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 MOV10L1Q9BXT6 1211 aaKnown RBP21.06■□□□□ 0.96
LIMS2-215ENST00000484252 OSBPL7Q9BZF2 842 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 KDM4CQ9H3R0 1056 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.06■□□□□ 0.96
LIMS2-215ENST00000484252 HOMER2Q9NSB8 354 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 PTPN22Q9Y2R2 807 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 CLGNO14967 610 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 KIF1CO43896 1103 aaKnown RBP21.06■□□□□ 0.96
LIMS2-215ENST00000484252 GARTP22102 1010 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 FGFR4P22455 802 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 MAPK4P31152 587 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 ABCD1P33897 745 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 SLC1A1P43005 524 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 MNAT1P51948 309 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 PPARDQ03181 441 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 ANKRD20A8PQ5CZ79 823 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 ANO5Q75V66 913 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 SV2AQ7L0J3 742 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 ZNF677Q86XU0 584 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 GPD1LQ8N335 351 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 POMGNT1Q8WZA1 660 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 CCDC114Q96M63 670 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 POP1Q99575 1024 aaKnown RBP21.06■□□□□ 0.96
LIMS2-215ENST00000484252 VPS33BQ9H267 617 aa21.06■□□□□ 0.96
LIMS2-215ENST00000484252 CTDP1Q9Y5B0 961 aaPredicted RBP21.06■□□□□ 0.96
LIMS2-215ENST00000484252 FDX1P10109 184 aa21.05■□□□□ 0.96
LIMS2-215ENST00000484252 ITIH2P19823 946 aa21.05■□□□□ 0.96
LIMS2-215ENST00000484252 SGO2Q562F6 1265 aa21.05■□□□□ 0.96
LIMS2-215ENST00000484252 ANKS4BQ8N8V4 417 aa21.05■□□□□ 0.96
LIMS2-215ENST00000484252 CCDC197Q8NCU1 140 aa21.05■□□□□ 0.96
LIMS2-215ENST00000484252 ZBED3Q96IU2 234 aaPredicted RBP21.05■□□□□ 0.96
LIMS2-215ENST00000484252 INTS9Q9NV88 658 aaKnown RBP21.05■□□□□ 0.96
LIMS2-215ENST00000484252 PCDHA10Q9Y5I2 948 aa21.05■□□□□ 0.96
LIMS2-215ENST00000484252 TNS1Q9HBL0 1735 aaKnown RBP21.05■□□□□ 0.96
LIMS2-215ENST00000484252 ZBED4O75132 1171 aa21.05■□□□□ 0.96
LIMS2-215ENST00000484252 RTP1P59025 263 aa21.05■□□□□ 0.96
LIMS2-215ENST00000484252 IFI35P80217 286 aaPredicted RBP21.05■□□□□ 0.96
LIMS2-215ENST00000484252 ZNF568Q3ZCX4 644 aa21.05■□□□□ 0.96
LIMS2-215ENST00000484252 BRDTQ58F21 947 aaPredicted RBP21.05■□□□□ 0.96
LIMS2-215ENST00000484252 ARHGEF16Q5VV41 709 aa21.05■□□□□ 0.96
LIMS2-215ENST00000484252 SLC39A4Q6P5W5 647 aa21.05■□□□□ 0.96
LIMS2-215ENST00000484252 CPNE8Q86YQ8 564 aa21.05■□□□□ 0.96
LIMS2-215ENST00000484252 GRK7Q8WTQ7 553 aa21.05■□□□□ 0.96
LIMS2-215ENST00000484252 KIFC3Q9BVG8 833 aa21.05■□□□□ 0.96
LIMS2-215ENST00000484252 A1CFQ9NQ94 594 aaKnown RBP21.05■□□□□ 0.96
LIMS2-215ENST00000484252 TOPORSQ9NS56 1045 aaPredicted RBP21.05■□□□□ 0.96
LIMS2-215ENST00000484252 ANAPC7Q9UJX3 599 aa21.05■□□□□ 0.96
LIMS2-215ENST00000484252 SMIM23A6NLE4 172 aa21.04■□□□□ 0.96
LIMS2-215ENST00000484252 H0YCG3 227 aa21.04■□□□□ 0.96
LIMS2-215ENST00000484252 CLDN3O15551 220 aa21.04■□□□□ 0.96
LIMS2-215ENST00000484252 RASSF9O75901 435 aa21.04■□□□□ 0.96
LIMS2-215ENST00000484252 UNGP13051 313 aaPredicted RBP21.04■□□□□ 0.96
LIMS2-215ENST00000484252 KRT5P13647 590 aa21.04■□□□□ 0.96
LIMS2-215ENST00000484252 KCNJ1P48048 391 aa21.04■□□□□ 0.96
LIMS2-215ENST00000484252 CAV1Q03135 178 aa21.04■□□□□ 0.96
LIMS2-215ENST00000484252 AUHQ13825 339 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms