RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SMG8Q8ND04 991 aaKnown RBP11.01□□□□□ -0.65
CPSF4-213ENST00000484112 CNNM3Q8NE01 707 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 RMDN1Q96DB5 314 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 CPB2Q96IY4 423 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 DRC1Q96MC2 740 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 USP28Q96RU2 1077 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 COLEC11Q9BWP8 271 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 EIF2AQ9BY44 585 aaKnown RBP11.01□□□□□ -0.65
CPSF4-213ENST00000484112 RNF39Q9H2S5 420 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 UBN1Q9NPG3 1134 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 MIOSQ9NXC5 875 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 EPS15L1Q9UBC2 864 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 FBXO2Q9UK22 296 aaPredicted RBP11.01□□□□□ -0.65
CPSF4-213ENST00000484112 SIT1Q9Y3P8 196 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 HES2Q9Y543 173 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 IPPQ9Y573 584 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 DENND4AQ7Z401 1863 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 C2orf16Q68DN1 1984 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 ARL5CA6NH57 179 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 PP2D1A8MPX8 630 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 SPTLC2O15270 562 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 TGM5O43548 720 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 LAMP2P13473 410 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 RPL17P18621 184 aaKnown RBP11□□□□□ -0.65
CPSF4-213ENST00000484112 GLRA2P23416 452 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 ABCD1P33897 745 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 NAMPTP43490 491 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 EFNA5P52803 228 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 DSG1Q02413 1049 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 CAPSQ13938 189 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 STK38Q15208 465 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 FAM187BQ17R55 369 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 CDCA2Q69YH5 1023 aaPredicted RBP11□□□□□ -0.65
CPSF4-213ENST00000484112 CYP26C1Q6V0L0 522 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 PPP4R3CPQ6ZMV5 832 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 DGLUCYQ7Z3D6 616 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 ZBTB8OSQ8IWT0 167 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 RABGGTAQ92696 567 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 ZNF707Q96C28 371 aaPredicted RBP11□□□□□ -0.65
CPSF4-213ENST00000484112 IFT74Q96LB3 600 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 ZFP42Q96MM3 310 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 PNMA5Q96PV4 448 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 POLR3FQ9H1D9 316 aaPredicted RBP11□□□□□ -0.65
CPSF4-213ENST00000484112 SEMA4AQ9H3S1 761 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 RXFP1Q9HBX9 757 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 ARHGEF3Q9NR81 526 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 PRMT7Q9NVM4 692 aaPredicted RBP11□□□□□ -0.65
CPSF4-213ENST00000484112 STK17AQ9UEE5 414 aa11□□□□□ -0.65
CPSF4-213ENST00000484112 MYH15Q9Y2K3 1946 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 MED19A0JLT2 244 aaPredicted RBP10.99□□□□□ -0.65
CPSF4-213ENST00000484112 E9PMD0 336 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 H0YCG3 227 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 INO80B-WBP1J3KQ70 363 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 TSPAN1O60635 241 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 SP9P0CG40 484 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 CDC25AP30304 524 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 RINT1Q6NUQ1 792 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 FAM173BQ6P4H8 233 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 DCLRE1AQ6PJP8 1040 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 CCDC73Q6ZRK6 1079 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 C1orf186Q6ZWK4 172 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 C1orf210Q8IVY1 113 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 DCLK2Q8N568 766 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 RASSF8Q8NHQ8 419 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 ASAP3Q8TDY4 903 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 KCNN1Q92952 543 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 NXPE3Q969Y0 559 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 GPR62Q9BZJ7 368 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 PRKD2Q9BZL6 878 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 FOXQ1Q9C009 403 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 TRIM6Q9C030 488 aaPredicted RBP10.99□□□□□ -0.65
CPSF4-213ENST00000484112 CSRNP2Q9H175 543 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 PLEKHA4Q9H4M7 779 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.99□□□□□ -0.65
CPSF4-213ENST00000484112 ODF2LQ9ULJ1 636 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 RBM19Q9Y4C8 960 aaKnown RBP10.99□□□□□ -0.65
CPSF4-213ENST00000484112 NUMBLQ9Y6R0 609 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 FAM186AA6NE01 2351 aa10.99□□□□□ -0.65
CPSF4-213ENST00000484112 MYO15AQ9UKN7 3530 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 RIF1Q5UIP0 2472 aaKnown RBP10.98□□□□□ -0.65
CPSF4-213ENST00000484112 CUTAO60888 179 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 LRRN2O75325 713 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 TADA2AO75478 443 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 PLA2G4BP0C869 781 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 FSHRP23945 695 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 AKAP5P24588 427 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 MARCKSP29966 332 aaPredicted RBP10.98□□□□□ -0.65
CPSF4-213ENST00000484112 DDIT3P35638 169 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 SLC12A3P55017 1021 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 NUCB2P80303 420 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 MBTD1Q05BQ5 628 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 DSC1Q08554 894 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 DMP1Q13316 513 aaPredicted RBP10.98□□□□□ -0.65
CPSF4-213ENST00000484112 MAPK6Q16659 721 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 USP41Q3LFD5 358 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 PHLDB3Q6NSJ2 640 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 FUT10Q6P4F1 479 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 NOTUMQ6P988 496 aa10.98□□□□□ -0.65
CPSF4-213ENST00000484112 ZC3H14Q6PJT7 736 aaKnown RBP10.98□□□□□ -0.65
CPSF4-213ENST00000484112 CDR2LQ86X02 465 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms