RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 ST7Q9NRC1 585 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 FTSJ1Q9UET6 329 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 ADAM29Q9UKF5 820 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 OGDHLQ9ULD0 1010 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 MAP3K2Q9Y2U5 619 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 ZHX2Q9Y6X8 837 aa4.48□□□□□ -1.69
LRCH3-217ENST00000483442 PFASO15067 1338 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 PRUNE2Q8WUY3 3088 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 VCANP13611 3396 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 BLACEA4D250 179 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 CXCL11O14625 94 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 FOXS1O43638 330 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 ZNF623O75123 536 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 IL18BPO95998 194 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 KNG1P01042 644 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 HMGCRP04035 888 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 IGKV5-2P06315 115 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 CYP2B6P20813 491 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 TMPOP42166 694 aaKnown RBP4.47□□□□□ -1.69
LRCH3-217ENST00000483442 GYG1P46976 350 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 GLRBP48167 497 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 TCP10Q12799 353 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 TUSC3Q13454 348 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 FXNQ16595 210 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 TNNI3KQ59H18 835 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 C9orf50Q5SZB4 431 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 SLFN13Q68D06 897 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 C15orf52Q6ZUT6 534 aaKnown RBP4.47□□□□□ -1.69
LRCH3-217ENST00000483442 USP53Q70EK8 1073 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 FASTKD5Q7L8L6 764 aaKnown RBP4.47□□□□□ -1.69
LRCH3-217ENST00000483442 OTOP3Q7RTS5 596 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 UBE3BQ7Z3V4 1068 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 TDRD7Q8NHU6 1098 aaKnown RBP4.47□□□□□ -1.69
LRCH3-217ENST00000483442 PHOSPHO1Q8TCT1 267 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 SMCR8Q8TEV9 937 aaPredicted RBP4.47□□□□□ -1.69
LRCH3-217ENST00000483442 HOOK2Q96ED9 719 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 ASB2Q96Q27 587 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 PHF20Q9BVI0 1012 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 VPS11Q9H270 941 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 DEF6Q9H4E7 631 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 GPR27Q9NS67 375 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 TMOD2Q9NZR1 351 aa4.47□□□□□ -1.69
LRCH3-217ENST00000483442 ANKRD18BA2A2Z9 1011 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 PI4KAP2A4QPH2 592 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 ACOT7O00154 380 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 FRAT2O75474 233 aaPredicted RBP4.46□□□□□ -1.7
LRCH3-217ENST00000483442 DDX58O95786 925 aaKnown RBP4.46□□□□□ -1.7
LRCH3-217ENST00000483442 HOXB7P09629 217 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 FGRP09769 529 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 FAHP16930 419 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 HIBADHP31937 336 aaKnown RBP4.46□□□□□ -1.7
LRCH3-217ENST00000483442 CSF2RBP32927 897 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 HMGA2P52926 109 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 SMAD3P84022 425 aaKnown RBP4.46□□□□□ -1.7
LRCH3-217ENST00000483442 RBM10P98175 930 aaKnown RBP4.46□□□□□ -1.7
LRCH3-217ENST00000483442 LMOD3Q0VAK6 560 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 MAP4K2Q12851 820 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 CHAF1AQ13111 956 aaPredicted RBP4.46□□□□□ -1.7
LRCH3-217ENST00000483442 SKIDA1Q1XH10 827 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 Q6ZUG5 572 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 FAM83AQ86UY5 434 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 STPG3Q8N7X2 389 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 PI4KAP1Q8N8J0 262 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 HNRNPLLQ8WVV9 542 aaKnown RBP4.46□□□□□ -1.7
LRCH3-217ENST00000483442 ATXN2LQ8WWM7 1075 aaKnown RBP4.46□□□□□ -1.7
LRCH3-217ENST00000483442 KCTD13Q8WZ19 329 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 BADQ92934 168 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 UHRF1Q96T88 793 aaPredicted RBP4.46□□□□□ -1.7
LRCH3-217ENST00000483442 KCNJ15Q99712 375 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 MRIQ9BWK5 157 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 C1QTNF1Q9BXJ1 281 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 CAPN10Q9HC96 672 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 DLL4Q9NR61 685 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 KCND1Q9NSA2 647 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 ZFP69BQ9UJL9 534 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 ZNF112Q9UJU3 913 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 ING1Q9UK53 422 aaPredicted RBP4.46□□□□□ -1.7
LRCH3-217ENST00000483442 GJD2Q9UKL4 321 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 PSME4Q14997 1843 aa4.46□□□□□ -1.7
LRCH3-217ENST00000483442 EYSQ5T1H1 3165 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 LAMA2P24043 3122 aaKnown RBP4.45□□□□□ -1.7
LRCH3-217ENST00000483442 TRIM75PA6NK02 468 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 CSF1RP07333 972 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 ZNF888P0CJ79 500 aaPredicted RBP4.45□□□□□ -1.7
LRCH3-217ENST00000483442 CCND3P30281 292 aaPredicted RBP4.45□□□□□ -1.7
LRCH3-217ENST00000483442 GDF5P43026 501 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 MRPS5P82675 430 aaKnown RBP4.45□□□□□ -1.7
LRCH3-217ENST00000483442 PFKPQ01813 784 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 NEXNQ0ZGT2 675 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 KLF10Q13118 480 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 IFIT5Q13325 482 aaKnown RBP4.45□□□□□ -1.7
LRCH3-217ENST00000483442 PAN2Q504Q3 1202 aaKnown RBP4.45□□□□□ -1.7
LRCH3-217ENST00000483442 IGFL4Q6B9Z1 124 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 VASNQ6EMK4 673 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 APOBEC3HQ6NTF7 200 aaKnown RBP4.45□□□□□ -1.7
LRCH3-217ENST00000483442 TCTN3Q6NUS6 607 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 KSR2Q6VAB6 950 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 LDHAL6AQ6ZMR3 332 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 EEPD1Q7L9B9 569 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 VPS37DQ86XT2 251 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms