RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 PCDHB2Q9Y5E7 798 aa16.31■□□□□ 0.2
PHGDH-205ENST00000482968 LACTBL1A8MY62 500 aa16.3■□□□□ 0.2
PHGDH-205ENST00000482968 IBSPP21815 317 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-205ENST00000482968 AKAP5P24588 427 aa16.3■□□□□ 0.2
PHGDH-205ENST00000482968 CDC25BP30305 580 aa16.3■□□□□ 0.2
PHGDH-205ENST00000482968 PBX1P40424 430 aa16.3■□□□□ 0.2
PHGDH-205ENST00000482968 SYCP1Q15431 976 aa16.3■□□□□ 0.2
PHGDH-205ENST00000482968 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-205ENST00000482968 SMG8Q8ND04 991 aaKnown RBP16.3■□□□□ 0.2
PHGDH-205ENST00000482968 ZNF516Q92618 1163 aa16.3■□□□□ 0.2
PHGDH-205ENST00000482968 FAM84AQ96KN4 292 aa16.3■□□□□ 0.2
PHGDH-205ENST00000482968 PCMTD1Q96MG8 357 aaPredicted RBP16.3■□□□□ 0.2
PHGDH-205ENST00000482968 RNF39Q9H2S5 420 aa16.3■□□□□ 0.2
PHGDH-205ENST00000482968 MEFVO15553 781 aaPredicted RBP16.29■□□□□ 0.2
PHGDH-205ENST00000482968 STX10O60499 249 aa16.29■□□□□ 0.2
PHGDH-205ENST00000482968 KLK7P49862 253 aa16.29■□□□□ 0.2
PHGDH-205ENST00000482968 YARSP54577 528 aaKnown RBP16.29■□□□□ 0.2
PHGDH-205ENST00000482968 KCNMA1Q12791 1236 aa16.29■□□□□ 0.2
PHGDH-205ENST00000482968 DSC3Q14574 896 aa16.29■□□□□ 0.2
PHGDH-205ENST00000482968 DBF4BQ8NFT6 615 aa16.29■□□□□ 0.2
PHGDH-205ENST00000482968 PDLIM2Q96JY6 352 aa16.29■□□□□ 0.2
PHGDH-205ENST00000482968 ERGIC2Q96RQ1 377 aa16.29■□□□□ 0.2
PHGDH-205ENST00000482968 TMEM117Q9H0C3 514 aa16.29■□□□□ 0.2
PHGDH-205ENST00000482968 PARP2Q9UGN5 583 aa16.29■□□□□ 0.2
PHGDH-205ENST00000482968 SCN5AQ14524 2016 aa16.29■□□□□ 0.2
PHGDH-205ENST00000482968 CITO14578 2027 aa16.29■□□□□ 0.2
PHGDH-205ENST00000482968 TRIP11Q15643 1979 aa16.29■□□□□ 0.2
PHGDH-205ENST00000482968 PTPRJQ12913 1337 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 A0A1W2PQC6 194 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 TTC26A0AVF1 554 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 TRIM43BA6NCK2 446 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 IL18RAPO95256 599 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 CLDN10P78369 228 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 ENPEPQ07075 957 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 SURF1Q15526 300 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 PLEKHG4Q58EX7 1191 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 SPECC1LQ69YQ0 1117 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 SV2AQ7L0J3 742 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 DEFB128Q7Z7B8 93 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 RTN4RL1Q86UN2 441 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-205ENST00000482968 TRIM43Q96BQ3 446 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-205ENST00000482968 CGRRF1Q99675 332 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 KLK14Q9P0G3 267 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 ANK1P16157 1881 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 TET1Q8NFU7 2136 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 RECQL4O94761 1208 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 GTF2H1P32780 548 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 TFAMQ00059 246 aaKnown RBP16.28■□□□□ 0.2
PHGDH-205ENST00000482968 MYL7Q01449 175 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 POU5F1Q01860 360 aaKnown RBP16.28■□□□□ 0.2
PHGDH-205ENST00000482968 KRT39Q6A163 491 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 GBP6Q6ZN66 633 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 OR5B17Q8NGF7 314 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 CXCL16Q9H2A7 254 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 TMEM8AQ9HCN3 771 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 RNF19AQ9NV58 838 aa16.28■□□□□ 0.2
PHGDH-205ENST00000482968 A0A0U1RQF3 1178 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 N4BP1O75113 896 aaKnown RBP16.27■□□□□ 0.2
PHGDH-205ENST00000482968 PARNO95453 639 aaKnown RBP16.27■□□□□ 0.2
PHGDH-205ENST00000482968 TIMP1P01033 207 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 C4BPAP04003 597 aaKnown RBP16.27■□□□□ 0.2
PHGDH-205ENST00000482968 RAG1P15918 1043 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 SLC9A1P19634 815 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 ITGB8P26012 769 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 MXI1P50539 228 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 EXOC3L4Q17RC7 722 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 JADE1Q6IE81 842 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 WDR49Q8IV35 697 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 RNF169Q8NCN4 708 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 SEPT8Q92599 483 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 TRAIPQ9BWF2 469 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 FTHL17Q9BXU8 183 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 ASB7Q9H672 318 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 PLEKHA5Q9HAU0 1116 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 RGS18Q9NS28 235 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 PCDH10Q9P2E7 1040 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 SIK3Q9Y2K2 1263 aa16.27■□□□□ 0.2
PHGDH-205ENST00000482968 GTPBP10A4D1E9 387 aaKnown RBP16.26■□□□□ 0.19
PHGDH-205ENST00000482968 MEIS3P2A8K0S8 358 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 ITGA4P13612 1032 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 CETN1Q12798 172 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 BIRC3Q13489 604 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 DUOXA2Q1HG44 320 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 EFCAB13Q8IY85 973 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 HACE1Q8IYU2 909 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 CPLX3Q8WVH0 158 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 LPPQ93052 612 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 FAM207AQ9NSI2 230 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-205ENST00000482968 GCNT4Q9P109 453 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 TANC1Q9C0D5 1861 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 KIAA0355O15063 1070 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 P4HA2O15460 535 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 ZNF623O75123 536 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 LRRN2O75325 713 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 CXCL10P02778 98 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 NFICP08651 508 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 TMEM191BP0C7N4 346 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 ACTN1P12814 892 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 PON1P27169 355 aa16.26■□□□□ 0.19
PHGDH-205ENST00000482968 RAB27AP51159 221 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms