RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 CCDC6Q16204 474 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 TATDN1Q6P1N9 297 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 MTHFD1LQ6UB35 978 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 ANKRD42Q8N9B4 389 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 GMCL1Q96IK5 515 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 LBHD1Q9BQE6 289 aaPredicted RBP13.26□□□□□ -0.29
CCDC78-213ENST00000482878 UBE2TQ9NPD8 197 aaPredicted RBP13.26□□□□□ -0.29
CCDC78-213ENST00000482878 ZMYND8Q9ULU4 1186 aaPredicted RBP13.26□□□□□ -0.29
CCDC78-213ENST00000482878 USP15Q9Y4E8 981 aaPredicted RBP13.26□□□□□ -0.29
CCDC78-213ENST00000482878 KLRG2A4D1S0 409 aaPredicted RBP13.26□□□□□ -0.29
CCDC78-213ENST00000482878 SORBS3O60504 671 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 FGFR4P22455 802 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 PDE6CP51160 858 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 PRKG1Q13976 671 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 ARHGEF19Q8IW93 802 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 RHOT2Q8IXI1 618 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 GMCL1P1Q8NEA9 526 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 PCDHA3Q9Y5H8 950 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 TCRBV7S2A1N4TA0A589 114 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 CCDC169A6NNP5 214 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 TISP43B9A030 160 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 POLRMTO00411 1230 aaKnown RBP13.26□□□□□ -0.29
CCDC78-213ENST00000482878 BMP3P12645 472 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 TPP2P29144 1249 aaPredicted RBP13.26□□□□□ -0.29
CCDC78-213ENST00000482878 SP4Q02446 784 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 RNASELQ05823 741 aaKnown RBP13.26□□□□□ -0.29
CCDC78-213ENST00000482878 TMEM179Q6ZVK1 233 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 PIGWQ7Z7B1 504 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 CPNE8Q86YQ8 564 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 EPS8L3Q8TE67 593 aaKnown RBP13.26□□□□□ -0.29
CCDC78-213ENST00000482878 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 RASAL2Q9UJF2 1139 aa13.26□□□□□ -0.29
CCDC78-213ENST00000482878 CTDP1Q9Y5B0 961 aaPredicted RBP13.26□□□□□ -0.29
CCDC78-213ENST00000482878 TCP11X1B4DZS4 312 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 ANKRD63C9JTQ0 380 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 ALADP13716 330 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 CHRNA3P32297 505 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 EN1Q05925 392 aaPredicted RBP13.25□□□□□ -0.29
CCDC78-213ENST00000482878 PPP2R5CQ13362 524 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 FAM47EQ6ZV65 393 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 MAIP1Q8WWC4 291 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 ZDHHC15Q96MV8 337 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 ZSWIM1Q9BR11 485 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 NKX1-2Q9UD57 310 aaPredicted RBP13.25□□□□□ -0.29
CCDC78-213ENST00000482878 SCOCQ9UIL1 159 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 LTBP1Q14766 1721 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 SYNGAP1Q96PV0 1343 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 A0A1W2PRG0 241 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 ATMINO43313 823 aaPredicted RBP13.25□□□□□ -0.29
CCDC78-213ENST00000482878 ECEL1O95672 775 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 COMTP21964 271 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 CTNNA2P26232 953 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 HADHBP55084 474 aaKnown RBP13.25□□□□□ -0.29
CCDC78-213ENST00000482878 MESDQ14696 234 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 ABCB5Q2M3G0 1257 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 C11orf63Q6NUN7 778 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 CCDC137Q6PK04 289 aaKnown RBP13.25□□□□□ -0.29
CCDC78-213ENST00000482878 OTUD6AQ7L8S5 288 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 VSIG1Q86XK7 387 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 KCTD17Q8N5Z5 321 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 RAB3IPQ96QF0 476 aaPredicted RBP13.25□□□□□ -0.29
CCDC78-213ENST00000482878 PCIF1Q9H4Z3 704 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 KCNK9Q9NPC2 374 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.25□□□□□ -0.29
CCDC78-213ENST00000482878 WDR35Q9P2L0 1181 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 SEL1LQ9UBV2 794 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 PRR12Q9ULL5 1215 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 PIK3CDO00329 1044 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 PYGMP11217 842 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 PEX5P50542 639 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 DBN1Q16643 649 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 NLGN1Q8N2Q7 840 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 UBL4BQ8N7F7 174 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 KAT5Q92993 513 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 GBP5Q96PP8 586 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 NUDCD1Q96RS6 583 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 ACP6Q9NPH0 428 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 PCYOX1Q9UHG3 505 aa13.25□□□□□ -0.29
CCDC78-213ENST00000482878 EMSYQ7Z589 1322 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 TAF1LQ8IZX4 1826 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 MIF4GDA9UHW6 222 aaKnown RBP13.24□□□□□ -0.29
CCDC78-213ENST00000482878 PRELPP51888 382 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 PPP3CAQ08209 521 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 DAW1Q8N136 415 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 LARGE2Q8N3Y3 721 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 GBP7Q8N8V2 638 aaPredicted RBP13.24□□□□□ -0.29
CCDC78-213ENST00000482878 SLC5A5Q92911 643 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 PCDHB18PQ96TA0 734 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 PTPN22Q9Y2R2 807 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 UBE4BO95155 1302 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 SNX3O60493 162 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 GAS7O60861 476 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 GH2P01242 217 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 BCRP11274 1271 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 SP100P23497 879 aaPredicted RBP13.24□□□□□ -0.29
CCDC78-213ENST00000482878 GPC5P78333 572 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
CCDC78-213ENST00000482878 RRP1BQ14684 758 aaKnown RBP13.24□□□□□ -0.29
CCDC78-213ENST00000482878 RASIP1Q5U651 963 aa13.24□□□□□ -0.29
CCDC78-213ENST00000482878 DNAJC9Q8WXX5 260 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms