RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 PANK2Q9BZ23 570 aa16.22■□□□□ 0.19
OPTN-210ENST00000482140 CACNG4Q9UBN1 327 aa16.22■□□□□ 0.19
OPTN-210ENST00000482140 USP15Q9Y4E8 981 aaPredicted RBP16.22■□□□□ 0.19
OPTN-210ENST00000482140 SF3B1O75533 1304 aaKnown RBP eCLIP16.21■□□□□ 0.19
OPTN-210ENST00000482140 HNRNPDLO14979 420 aaKnown RBP16.21■□□□□ 0.19
OPTN-210ENST00000482140 CUTAO60888 179 aa16.21■□□□□ 0.19
OPTN-210ENST00000482140 BRD1O95696 1058 aa16.21■□□□□ 0.19
OPTN-210ENST00000482140 USP41Q3LFD5 358 aa16.21■□□□□ 0.19
OPTN-210ENST00000482140 ATL3Q6DD88 541 aa16.21■□□□□ 0.19
OPTN-210ENST00000482140 TAS1R1Q7RTX1 841 aa16.21■□□□□ 0.19
OPTN-210ENST00000482140 PDILTQ8N807 584 aa16.21■□□□□ 0.19
OPTN-210ENST00000482140 HASPINQ8TF76 798 aa16.21■□□□□ 0.19
OPTN-210ENST00000482140 DDX12PQ92771 950 aa16.21■□□□□ 0.19
OPTN-210ENST00000482140 KLHL5Q96PQ7 755 aa16.21■□□□□ 0.19
OPTN-210ENST00000482140 CXCL16Q9H2A7 254 aa16.21■□□□□ 0.19
OPTN-210ENST00000482140 DZANK1Q9NVP4 752 aa16.21■□□□□ 0.19
OPTN-210ENST00000482140 CFAP45Q9UL16 551 aa16.21■□□□□ 0.19
OPTN-210ENST00000482140 TBX20Q9UMR3 447 aa16.21■□□□□ 0.19
OPTN-210ENST00000482140 ABLIM1O14639 778 aa16.2■□□□□ 0.18
OPTN-210ENST00000482140 ADH1AP07327 375 aa16.2■□□□□ 0.18
OPTN-210ENST00000482140 CNPP09543 421 aaKnown RBP16.2■□□□□ 0.18
OPTN-210ENST00000482140 EPCAMP16422 314 aa16.2■□□□□ 0.18
OPTN-210ENST00000482140 NMT1P30419 496 aaKnown RBP16.2■□□□□ 0.18
OPTN-210ENST00000482140 DSG1Q02413 1049 aa16.2■□□□□ 0.18
OPTN-210ENST00000482140 ZP2Q05996 745 aa16.2■□□□□ 0.18
OPTN-210ENST00000482140 MCL1Q07820 350 aa16.2■□□□□ 0.18
OPTN-210ENST00000482140 PKP1Q13835 747 aa16.2■□□□□ 0.18
OPTN-210ENST00000482140 CES5AQ6NT32 575 aa16.2■□□□□ 0.18
OPTN-210ENST00000482140 RNF168Q8IYW5 571 aaPredicted RBP16.2■□□□□ 0.18
OPTN-210ENST00000482140 KCNG4Q8TDN1 519 aa16.2■□□□□ 0.18
OPTN-210ENST00000482140 SNX27Q96L92 541 aa16.2■□□□□ 0.18
OPTN-210ENST00000482140 UROC1Q96N76 676 aa16.2■□□□□ 0.18
OPTN-210ENST00000482140 PPP1R10Q96QC0 940 aaKnown RBP16.2■□□□□ 0.18
OPTN-210ENST00000482140 PAAF1Q9BRP4 392 aa16.2■□□□□ 0.18
OPTN-210ENST00000482140 GPR62Q9BZJ7 368 aa16.2■□□□□ 0.18
OPTN-210ENST00000482140 SLC38A7Q9NVC3 462 aa16.2■□□□□ 0.18
OPTN-210ENST00000482140 SEL1LQ9UBV2 794 aa16.2■□□□□ 0.18
OPTN-210ENST00000482140 SMIM28A0A1B0GU29 152 aa16.19■□□□□ 0.18
OPTN-210ENST00000482140 MYMKA6NI61 221 aa16.19■□□□□ 0.18
OPTN-210ENST00000482140 KIF4AO95239 1232 aa16.19■□□□□ 0.18
OPTN-210ENST00000482140 IDEP14735 1019 aa16.19■□□□□ 0.18
OPTN-210ENST00000482140 GAP43P17677 238 aa16.19■□□□□ 0.18
OPTN-210ENST00000482140 ME1P48163 572 aa16.19■□□□□ 0.18
OPTN-210ENST00000482140 ELAVL2Q12926 359 aaKnown RBP16.19■□□□□ 0.18
OPTN-210ENST00000482140 NAB2Q15742 525 aa16.19■□□□□ 0.18
OPTN-210ENST00000482140 SEZ6Q53EL9 994 aa16.19■□□□□ 0.18
OPTN-210ENST00000482140 SYCE2Q6PIF2 218 aa16.19■□□□□ 0.18
OPTN-210ENST00000482140 SFR1Q86XK3 245 aa16.19■□□□□ 0.18
OPTN-210ENST00000482140 SLC22A17Q8WUG5 538 aa16.19■□□□□ 0.18
OPTN-210ENST00000482140 RIN2Q8WYP3 895 aaPredicted RBP16.19■□□□□ 0.18
OPTN-210ENST00000482140 KCNN1Q92952 543 aa16.19■□□□□ 0.18
OPTN-210ENST00000482140 B3GALT6Q96L58 329 aa16.19■□□□□ 0.18
OPTN-210ENST00000482140 S1PR5Q9H228 398 aa16.19■□□□□ 0.18
OPTN-210ENST00000482140 CD320Q9NPF0 282 aa16.19■□□□□ 0.18
OPTN-210ENST00000482140 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.19■□□□□ 0.18
OPTN-210ENST00000482140 PDCD11Q14690 1871 aaKnown RBP16.18■□□□□ 0.18
OPTN-210ENST00000482140 A0A087X0B3 334 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 LILRB3O75022 631 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 B3GAT3O94766 335 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 EFEMP2O95967 443 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 PIGRP01833 764 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 CLTAP09496 248 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 CLCN4P51793 760 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 GTF2BQ00403 316 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 CREMQ03060 361 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 ITIH3Q06033 890 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 BECN1Q14457 450 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 KYAT1Q16773 422 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 XKR4Q5GH76 650 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 RARS2Q5T160 578 aaKnown RBP16.18■□□□□ 0.18
OPTN-210ENST00000482140 FAM171A1Q5VUB5 890 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 KIAA0319Q5VV43 1072 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 ELMSAN1Q6PJG2 1045 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 CEP57Q86XR8 500 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 MAP4K3Q8IVH8 894 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 FBXL18Q96ME1 805 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 PHF7Q9BWX1 381 aaPredicted RBP16.18■□□□□ 0.18
OPTN-210ENST00000482140 LRRC27Q9C0I9 530 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 MRPL44Q9H9J2 332 aaKnown RBP16.18■□□□□ 0.18
OPTN-210ENST00000482140 CHST7Q9NS84 486 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 CNTN3Q9P232 1028 aa16.18■□□□□ 0.18
OPTN-210ENST00000482140 PLXNA3P51805 1871 aa16.17■□□□□ 0.18
OPTN-210ENST00000482140 TEX28O15482 410 aa16.17■□□□□ 0.18
OPTN-210ENST00000482140 KCNE1P15382 129 aa16.17■□□□□ 0.18
OPTN-210ENST00000482140 CLCNKBP51801 687 aa16.17■□□□□ 0.18
OPTN-210ENST00000482140 DNM1Q05193 864 aaKnown RBP16.17■□□□□ 0.18
OPTN-210ENST00000482140 CBX2Q14781 532 aaPredicted RBP16.17■□□□□ 0.18
OPTN-210ENST00000482140 ZC2HC1CQ53FD0 456 aaPredicted RBP16.17■□□□□ 0.18
OPTN-210ENST00000482140 DCLRE1AQ6PJP8 1040 aa16.17■□□□□ 0.18
OPTN-210ENST00000482140 ALKAL1Q6UXT8 129 aa16.17■□□□□ 0.18
OPTN-210ENST00000482140 GPR65Q8IYL9 337 aa16.17■□□□□ 0.18
OPTN-210ENST00000482140 SUSD6Q92537 303 aa16.17■□□□□ 0.18
OPTN-210ENST00000482140 HVCN1Q96D96 273 aa16.17■□□□□ 0.18
OPTN-210ENST00000482140 DDX27Q96GQ7 796 aaKnown RBP16.17■□□□□ 0.18
OPTN-210ENST00000482140 RIPOR3Q96MK2 946 aa16.17■□□□□ 0.18
OPTN-210ENST00000482140 FIZ1Q96SL8 496 aa16.17■□□□□ 0.18
OPTN-210ENST00000482140 TTPALQ9BTX7 342 aa16.17■□□□□ 0.18
OPTN-210ENST00000482140 ADAM7Q9H2U9 754 aa16.17■□□□□ 0.18
OPTN-210ENST00000482140 CUEDC2Q9H467 287 aa16.17■□□□□ 0.18
OPTN-210ENST00000482140 ST6GALNAC4Q9H4F1 302 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms