RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 NRDE2Q9H7Z3 1164 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 MINDY3Q9H8M7 445 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 TBC1D13Q9NVG8 400 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 DNAJB4Q9UDY4 337 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 PCDHB2Q9Y5E7 798 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 HCFC2Q9Y5Z7 792 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 KIAA1671Q9BY89 1806 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 STK36Q9NRP7 1315 aa10.04□□□□□ -0.8
HLA-B-253ENST00000481849 ATG2AQ2TAZ0 1938 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 A0A087WWV3 80 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 LOC100996750A0A140TA64 210 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 B4GALT3O60512 393 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 DKC1O60832 514 aaKnown RBP eCLIP10.03□□□□□ -0.8
HLA-B-253ENST00000481849 OFD1O75665 1012 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 LARGE1O95461 756 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 SKIP12755 728 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 GCFC2P16383 781 aaKnown RBP10.03□□□□□ -0.8
HLA-B-253ENST00000481849 KRT2P35908 639 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 PTGIRP43119 386 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 SLC11A1P49279 550 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 AFF1P51825 1210 aaKnown RBP10.03□□□□□ -0.8
HLA-B-253ENST00000481849 LAMTOR4Q0VGL1 99 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 KCNC3Q14003 757 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 BMS1Q14692 1282 aaKnown RBP10.03□□□□□ -0.8
HLA-B-253ENST00000481849 EMC2Q15006 297 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 TMEM259Q4ZIN3 620 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 RARS2Q5T160 578 aaKnown RBP10.03□□□□□ -0.8
HLA-B-253ENST00000481849 PPP4R3AQ6IN85 833 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 TPH2Q8IWU9 490 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 FAM177A1Q8N128 213 aaPredicted RBP10.03□□□□□ -0.8
HLA-B-253ENST00000481849 URGCPQ8TCY9 931 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 PSPC1Q8WXF1 523 aaKnown RBP10.03□□□□□ -0.8
HLA-B-253ENST00000481849 RMDN1Q96DB5 314 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 PGBD4Q96DM1 585 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 PRRX2Q99811 253 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 KRTAP4-6Q9BYQ5 205 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 IFT122Q9HBG6 1241 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 AGPAT5Q9NUQ2 364 aa10.03□□□□□ -0.8
HLA-B-253ENST00000481849 PLXNA4Q9HCM2 1894 aa10.02□□□□□ -0.8
HLA-B-253ENST00000481849 FRYLO94915 3013 aa10.02□□□□□ -0.8
HLA-B-253ENST00000481849 PRR23AA6NEV1 266 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 PROB1E7EW31 1015 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 TBX3O15119 743 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 JAK2O60674 1132 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 DDHD2O94830 711 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 BAG4O95429 457 aaKnown RBP10.02□□□□□ -0.81
HLA-B-253ENST00000481849 POMCP01189 267 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 GALTP07902 379 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 FDPSP14324 419 aaKnown RBP10.02□□□□□ -0.81
HLA-B-253ENST00000481849 EPCAMP16422 314 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 HOXB8P17481 243 aaPredicted RBP10.02□□□□□ -0.81
HLA-B-253ENST00000481849 ATP2B1P20020 1258 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 RAB27AP51159 221 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 KCNMA1Q12791 1236 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 ME3Q16798 604 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 PTPN21Q16825 1174 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 TPRNQ4KMQ1 711 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 CES5AQ6NT32 575 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 AGMOQ6ZNB7 445 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 OTUD6AQ7L8S5 288 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 SUGP1Q8IWZ8 645 aaKnown RBP10.02□□□□□ -0.81
HLA-B-253ENST00000481849 RNF149Q8NC42 400 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 FEZF2Q8TBJ5 459 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 WASF1Q92558 559 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 IGSF21Q96ID5 467 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 FAM193BQ96PV7 902 aaPredicted RBP10.02□□□□□ -0.81
HLA-B-253ENST00000481849 NAP1L4Q99733 375 aaKnown RBP10.02□□□□□ -0.81
HLA-B-253ENST00000481849 APOL6Q9BWW8 343 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 ZBP1Q9H171 429 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 POMKQ9H5K3 350 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 DHX33Q9H6R0 707 aaKnown RBP10.02□□□□□ -0.81
HLA-B-253ENST00000481849 ZSWIM4Q9H7M6 989 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 BRMS1Q9HCU9 246 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 TECTAO75443 2155 aa10.02□□□□□ -0.81
HLA-B-253ENST00000481849 SMG1Q96Q15 3661 aaKnown RBP10.01□□□□□ -0.81
HLA-B-253ENST00000481849 ESPNB1AK53 854 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 BTBD18B2RXH4 712 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 C2CD4DB7Z1M9 353 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 INO80B-WBP1J3KQ70 363 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 C2CD2LO14523 706 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 LILRA1O75019 489 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 ZNF623O75123 536 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 ERLIN2O94905 339 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 MYBP10242 640 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 CTSAP10619 480 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 HOXA11P31270 313 aaPredicted RBP10.01□□□□□ -0.81
HLA-B-253ENST00000481849 TXKP42681 527 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 SPIRE1Q08AE8 756 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 ANKRD1Q15327 319 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 UBXN11Q5T124 520 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 TMC5Q6UXY8 1006 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 SRGAP1Q7Z6B7 1085 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 DDX53Q86TM3 631 aaKnown RBP10.01□□□□□ -0.81
HLA-B-253ENST00000481849 FERMT3Q86UX7 667 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 C4orf19Q8IY42 314 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 EXOC8Q8IYI6 725 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 SLFN12Q8IYM2 578 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 ASAP3Q8TDY4 903 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 TCP11Q8WWU5 503 aa10.01□□□□□ -0.81
HLA-B-253ENST00000481849 GTF3C6Q969F1 213 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms