RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 WNT8BQ93098 351 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 PIGSQ96S52 555 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 ASPNQ9BXN1 380 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 CD244Q9BZW8 370 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 SEMA4AQ9H3S1 761 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 COMMD8Q9NX08 183 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 MTSS1O43312 755 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 BNIP3LO60238 219 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 ERAL1O75616 437 aaKnown RBP8.94□□□□□ -0.98
LSM5-210ENST00000480956 TSPAN9O75954 239 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 A1BGP04217 495 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 AMY2AP04746 511 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 MYL4P12829 197 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 AMY2BP19961 511 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 MAPK4P31152 587 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 SEC24CP53992 1094 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 HTRA4P83105 476 aaPredicted RBP8.94□□□□□ -0.98
LSM5-210ENST00000480956 CDK17Q00537 523 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 CHAF1BQ13112 559 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 GPR19Q15760 415 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 FAM117BQ6P1L5 589 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 BORAQ6PGQ7 559 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 TMC6Q7Z403 805 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 R3HCC1LQ7Z5L2 792 aaKnown RBP8.94□□□□□ -0.98
LSM5-210ENST00000480956 TSPYL5Q86VY4 417 aaPredicted RBP8.94□□□□□ -0.98
LSM5-210ENST00000480956 ZNF619Q8N2I2 560 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 FEM1CQ96JP0 617 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 HPF1Q9NWY4 346 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 IGSF9Q9P2J2 1179 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 AFF4Q9UHB7 1163 aaKnown RBP8.94□□□□□ -0.98
LSM5-210ENST00000480956 PCOLCE2Q9UKZ9 415 aa8.94□□□□□ -0.98
LSM5-210ENST00000480956 NT5C1B-RDH14C9J2C7 533 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 SCDO00767 359 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 RPLP2P05387 115 aaKnown RBP8.93□□□□□ -0.98
LSM5-210ENST00000480956 MLH1P40692 756 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 SLC12A2P55011 1212 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 CCT2P78371 535 aaKnown RBP8.93□□□□□ -0.98
LSM5-210ENST00000480956 CREB5Q02930 508 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 TARBP2Q15633 366 aaKnown RBP8.93□□□□□ -0.98
LSM5-210ENST00000480956 MAP3K21Q5TCX8 1036 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 ARHGAP36Q6ZRI8 547 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 MIGA2Q7L4E1 593 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 TTC7BQ86TV6 843 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 KSR1Q8IVT5 923 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 KCTD6Q8NC69 237 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 FNIP1Q8TF40 1166 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 RSAD2Q8WXG1 361 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 SUCLG2Q96I99 432 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 CHAMP1Q96JM3 812 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 FBXL18Q96ME1 805 aa8.93□□□□□ -0.98
LSM5-210ENST00000480956 SCAF8Q9UPN6 1271 aaKnown RBP8.93□□□□□ -0.98
LSM5-210ENST00000480956 TSPAN3O60637 253 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 MLYCDO95822 493 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 ITGA2BP08514 1039 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 NR2F1P10589 423 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 HDCP19113 662 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 NNMTP40261 264 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 HADHAP40939 763 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 HK3P52790 923 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 NKX6-1P78426 367 aaPredicted RBP8.92□□□□□ -0.98
LSM5-210ENST00000480956 HMGN5P82970 282 aaKnown RBP8.92□□□□□ -0.98
LSM5-210ENST00000480956 MC1RQ01726 317 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 MALLQ13021 153 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 NOGQ13253 232 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 CUL4BQ13620 913 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 UBAP2LQ14157 1087 aaKnown RBP8.92□□□□□ -0.98
LSM5-210ENST00000480956 DBN1Q16643 649 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 VWA3BQ502W6 1294 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 CPZQ66K79 652 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 EP400NLQ6ZTU2 488 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 SLC9B2Q86UD5 537 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 DNAJB8Q8NHS0 232 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 TAF4BQ92750 862 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 EID2BQ96D98 161 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 CALML4Q96GE6 196 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 WNT8AQ9H1J5 351 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 PRDM13Q9H4Q3 707 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 MLXIPQ9HAP2 919 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 RAD18Q9NS91 495 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 LMBRD1Q9NUN5 540 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.92□□□□□ -0.98
LSM5-210ENST00000480956 POGKQ9P215 609 aa8.92□□□□□ -0.98
LSM5-210ENST00000480956 CCDC69A6NI79 296 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 MEIS1O00470 390 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 PIP5K1BO14986 540 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 CSF1P09603 554 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 CSH1P0DML2 217 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 CSH2P0DML3 217 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 WASP42768 502 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 PRPF4BQ13523 1007 aaKnown RBP8.91□□□□□ -0.98
LSM5-210ENST00000480956 TNIP1Q15025 636 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 EPHA7Q15375 998 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 NFRKBQ6P4R8 1299 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 SLC22A25Q6T423 547 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 TRIM44Q96DX7 344 aaPredicted RBP8.91□□□□□ -0.98
LSM5-210ENST00000480956 FSD1Q9BTV5 496 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 FOXQ1Q9C009 403 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 COL20A1Q9P218 1284 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 TBX20Q9UMR3 447 aa8.91□□□□□ -0.98
LSM5-210ENST00000480956 B3GALT1Q9Y5Z6 326 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms