RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 USP41Q3LFD5 358 aa18.63■□□□□ 0.57
HSPG2-209ENST00000480900 XKR4Q5GH76 650 aa18.63■□□□□ 0.57
HSPG2-209ENST00000480900 KIAA1841Q6NSI8 718 aa18.63■□□□□ 0.57
HSPG2-209ENST00000480900 ZBTB33Q86T24 672 aa18.63■□□□□ 0.57
HSPG2-209ENST00000480900 MYCT1Q8N699 235 aa18.63■□□□□ 0.57
HSPG2-209ENST00000480900 ZNF396Q96N95 335 aaPredicted RBP18.63■□□□□ 0.57
HSPG2-209ENST00000480900 PPP1R10Q96QC0 940 aaKnown RBP18.63■□□□□ 0.57
HSPG2-209ENST00000480900 PAAF1Q9BRP4 392 aa18.63■□□□□ 0.57
HSPG2-209ENST00000480900 C1QTNF1Q9BXJ1 281 aa18.63■□□□□ 0.57
HSPG2-209ENST00000480900 ADAM7Q9H2U9 754 aa18.63■□□□□ 0.57
HSPG2-209ENST00000480900 RXFP1Q9HBX9 757 aa18.63■□□□□ 0.57
HSPG2-209ENST00000480900 CACNG4Q9UBN1 327 aa18.63■□□□□ 0.57
HSPG2-209ENST00000480900 SF3B1O75533 1304 aaKnown RBP eCLIP18.63■□□□□ 0.57
HSPG2-209ENST00000480900 TRIOO75962 3097 aa18.63■□□□□ 0.57
HSPG2-209ENST00000480900 PI4K2BG5E9Z4 385 aa18.62■□□□□ 0.57
HSPG2-209ENST00000480900 K7ENM7 598 aa18.62■□□□□ 0.57
HSPG2-209ENST00000480900 C2CD2LO14523 706 aa18.62■□□□□ 0.57
HSPG2-209ENST00000480900 TADA2AO75478 443 aa18.62■□□□□ 0.57
HSPG2-209ENST00000480900 CLCN4P51793 760 aa18.62■□□□□ 0.57
HSPG2-209ENST00000480900 STK38Q15208 465 aa18.62■□□□□ 0.57
HSPG2-209ENST00000480900 CES5AQ6NT32 575 aa18.62■□□□□ 0.57
HSPG2-209ENST00000480900 ALKAL1Q6UXT8 129 aa18.62■□□□□ 0.57
HSPG2-209ENST00000480900 LINC00301Q8NCQ3 95 aa18.62■□□□□ 0.57
HSPG2-209ENST00000480900 RABGGTAQ92696 567 aa18.62■□□□□ 0.57
HSPG2-209ENST00000480900 FBXL18Q96ME1 805 aa18.62■□□□□ 0.57
HSPG2-209ENST00000480900 ACAP3Q96P50 834 aa18.62■□□□□ 0.57
HSPG2-209ENST00000480900 APOL5Q9BWW9 433 aa18.62■□□□□ 0.57
HSPG2-209ENST00000480900 EPHX3Q9H6B9 360 aa18.62■□□□□ 0.57
HSPG2-209ENST00000480900 ANKFY1Q9P2R3 1169 aa18.62■□□□□ 0.57
HSPG2-209ENST00000480900 ANK1P16157 1881 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 SMIM28A0A1B0GU29 152 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 LOC730098B7Z3J9 87 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 TEX28O15482 410 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 TRAK2O60296 914 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 KIF4AO95239 1232 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 ABCD1P33897 745 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 OSTNP61366 133 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 CREMQ03060 361 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 MCL1Q07820 350 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 ELAVL2Q12926 359 aaKnown RBP18.61■□□□□ 0.57
HSPG2-209ENST00000480900 GLRA4Q5JXX5 417 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 RRAGBQ5VZM2 374 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 CCDC73Q6ZRK6 1079 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 BICD1Q96G01 975 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 ZBTB45Q96K62 511 aaPredicted RBP18.61■□□□□ 0.57
HSPG2-209ENST00000480900 SNX27Q96L92 541 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 UROC1Q96N76 676 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 NECTIN4Q96NY8 510 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.61■□□□□ 0.57
HSPG2-209ENST00000480900 SLC38A7Q9NVC3 462 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 TBX20Q9UMR3 447 aa18.61■□□□□ 0.57
HSPG2-209ENST00000480900 TMEM189-UBE2V1I3L0A0 370 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 SPTLC2O15270 562 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 CLDN3O15551 220 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 YEATS4O95619 227 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 C1RP00736 705 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 PIGRP01833 764 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 ZSCAN22P10073 491 aaPredicted RBP18.6■□□□□ 0.57
HSPG2-209ENST00000480900 HARSP12081 509 aaKnown RBP18.6■□□□□ 0.57
HSPG2-209ENST00000480900 ALADP13716 330 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 KCNE1P15382 129 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 MTHFRP42898 656 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 RARS2Q5T160 578 aaKnown RBP18.6■□□□□ 0.57
HSPG2-209ENST00000480900 HASPINQ8TF76 798 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 B3GALT6Q96L58 329 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 FIZ1Q96SL8 496 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 ZHX3Q9H4I2 956 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 SFXN1Q9H9B4 322 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 CNTN3Q9P232 1028 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 FNIP2Q9P278 1114 aa18.6■□□□□ 0.57
HSPG2-209ENST00000480900 DOCK6Q96HP0 2047 aa18.59■□□□□ 0.57
HSPG2-209ENST00000480900 TCHHQ07283 1943 aa18.59■□□□□ 0.57
HSPG2-209ENST00000480900 HNRNPDLO14979 420 aaKnown RBP18.59■□□□□ 0.57
HSPG2-209ENST00000480900 DCXO43602 365 aa18.59■□□□□ 0.57
HSPG2-209ENST00000480900 PPP6R2O75170 966 aa18.59■□□□□ 0.57
HSPG2-209ENST00000480900 GLUD1P00367 558 aa18.59■□□□□ 0.57
HSPG2-209ENST00000480900 F13A1P00488 732 aa18.59■□□□□ 0.57
HSPG2-209ENST00000480900 LIG4P49917 911 aa18.59■□□□□ 0.57
HSPG2-209ENST00000480900 ELMSAN1Q6PJG2 1045 aa18.59■□□□□ 0.57
HSPG2-209ENST00000480900 DCLRE1AQ6PJP8 1040 aa18.59■□□□□ 0.57
HSPG2-209ENST00000480900 SV2BQ7L1I2 683 aa18.59■□□□□ 0.57
HSPG2-209ENST00000480900 RIN2Q8WYP3 895 aaPredicted RBP18.59■□□□□ 0.57
HSPG2-209ENST00000480900 RIPOR3Q96MK2 946 aa18.59■□□□□ 0.57
HSPG2-209ENST00000480900 TTPALQ9BTX7 342 aa18.59■□□□□ 0.57
HSPG2-209ENST00000480900 ST6GALNAC4Q9H4F1 302 aa18.59■□□□□ 0.57
HSPG2-209ENST00000480900 TFIP11Q9UBB9 837 aaKnown RBP18.59■□□□□ 0.57
HSPG2-209ENST00000480900 DPP7Q9UHL4 492 aa18.59■□□□□ 0.57
HSPG2-209ENST00000480900 TECTAO75443 2155 aa18.59■□□□□ 0.57
HSPG2-209ENST00000480900 DOCK8Q8NF50 2099 aa18.58■□□□□ 0.57
HSPG2-209ENST00000480900 STAT6P42226 847 aa18.58■□□□□ 0.56
HSPG2-209ENST00000480900 MATR3P43243 847 aaKnown RBP eCLIP18.58■□□□□ 0.56
HSPG2-209ENST00000480900 GTF2BQ00403 316 aa18.58■□□□□ 0.56
HSPG2-209ENST00000480900 SOX4Q06945 474 aaPredicted RBP18.58■□□□□ 0.56
HSPG2-209ENST00000480900 KYAT1Q16773 422 aa18.58■□□□□ 0.56
HSPG2-209ENST00000480900 UPP1Q16831 310 aa18.58■□□□□ 0.56
HSPG2-209ENST00000480900 FAM171A1Q5VUB5 890 aa18.58■□□□□ 0.56
HSPG2-209ENST00000480900 DYMQ7RTS9 669 aa18.58■□□□□ 0.56
HSPG2-209ENST00000480900 RNF135Q8IUD6 432 aa18.58■□□□□ 0.56
HSPG2-209ENST00000480900 C12orf76Q8N812 135 aaPredicted RBP18.58■□□□□ 0.56
HSPG2-209ENST00000480900 PIK3R5Q8WYR1 880 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms