RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ATOH1Q92858 354 aaPredicted RBP16.77■□□□□ 0.28
LIMS3-203ENST00000480744 NT5C3AQ9H0P0 336 aa16.77■□□□□ 0.28
LIMS3-203ENST00000480744 FBXL21Q9UKT6 434 aa16.77■□□□□ 0.28
LIMS3-203ENST00000480744 PHLPP2Q6ZVD8 1323 aa16.76■□□□□ 0.27
LIMS3-203ENST00000480744 H0Y858 1186 aa16.76■□□□□ 0.27
LIMS3-203ENST00000480744 LAD1O00515 517 aa16.76■□□□□ 0.27
LIMS3-203ENST00000480744 ELAVL2Q12926 359 aaKnown RBP16.76■□□□□ 0.27
LIMS3-203ENST00000480744 DMP1Q13316 513 aaPredicted RBP16.76■□□□□ 0.27
LIMS3-203ENST00000480744 NAB2Q15742 525 aa16.76■□□□□ 0.27
LIMS3-203ENST00000480744 IL17AQ16552 155 aa16.76■□□□□ 0.27
LIMS3-203ENST00000480744 ASTLQ6HA08 431 aaPredicted RBP16.76■□□□□ 0.27
LIMS3-203ENST00000480744 LILRA6Q6PI73 481 aa16.76■□□□□ 0.27
LIMS3-203ENST00000480744 GET4Q7L5D6 327 aaPredicted RBP16.76■□□□□ 0.27
LIMS3-203ENST00000480744 RSAD2Q8WXG1 361 aa16.76■□□□□ 0.27
LIMS3-203ENST00000480744 PIK3R5Q8WYR1 880 aa16.76■□□□□ 0.27
LIMS3-203ENST00000480744 MYADMQ96S97 322 aa16.76■□□□□ 0.27
LIMS3-203ENST00000480744 RUSC1Q9BVN2 902 aa16.76■□□□□ 0.27
LIMS3-203ENST00000480744 PRKD2Q9BZL6 878 aa16.76■□□□□ 0.27
LIMS3-203ENST00000480744 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.76■□□□□ 0.27
LIMS3-203ENST00000480744 ZDHHC7Q9NXF8 308 aa16.76■□□□□ 0.27
LIMS3-203ENST00000480744 IGSF9Q9P2J2 1179 aa16.76■□□□□ 0.27
LIMS3-203ENST00000480744 ZMYND10O75800 440 aa16.75■□□□□ 0.27
LIMS3-203ENST00000480744 C1RP00736 705 aa16.75■□□□□ 0.27
LIMS3-203ENST00000480744 PRPHP41219 470 aa16.75■□□□□ 0.27
LIMS3-203ENST00000480744 NPTX2P47972 431 aa16.75■□□□□ 0.27
LIMS3-203ENST00000480744 YARSP54577 528 aaKnown RBP16.75■□□□□ 0.27
LIMS3-203ENST00000480744 OSTNP61366 133 aa16.75■□□□□ 0.27
LIMS3-203ENST00000480744 ZNF568Q3ZCX4 644 aa16.75■□□□□ 0.27
LIMS3-203ENST00000480744 LIN9Q5TKA1 542 aa16.75■□□□□ 0.27
LIMS3-203ENST00000480744 CEP120Q8N960 986 aa16.75■□□□□ 0.27
LIMS3-203ENST00000480744 LNX1Q8TBB1 728 aaPredicted RBP16.75■□□□□ 0.27
LIMS3-203ENST00000480744 DRC1Q96MC2 740 aa16.75■□□□□ 0.27
LIMS3-203ENST00000480744 CLSTN3Q9BQT9 956 aa16.75■□□□□ 0.27
LIMS3-203ENST00000480744 RHOBTB2Q9BYZ6 727 aa16.75■□□□□ 0.27
LIMS3-203ENST00000480744 IRF2BPLQ9H1B7 796 aa16.75■□□□□ 0.27
LIMS3-203ENST00000480744 KMT5AQ9NQR1 393 aa16.75■□□□□ 0.27
LIMS3-203ENST00000480744 DUSP12Q9UNI6 340 aa16.75■□□□□ 0.27
LIMS3-203ENST00000480744 TNFSF13BQ9Y275 285 aa16.75■□□□□ 0.27
LIMS3-203ENST00000480744 PDCD11Q14690 1871 aaKnown RBP16.75■□□□□ 0.27
LIMS3-203ENST00000480744 H3BQV1 296 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 GALR2O43603 387 aaPredicted RBP16.74■□□□□ 0.27
LIMS3-203ENST00000480744 NARSO43776 548 aaKnown RBP16.74■□□□□ 0.27
LIMS3-203ENST00000480744 B3GAT3O94766 335 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 HARSP12081 509 aaKnown RBP16.74■□□□□ 0.27
LIMS3-203ENST00000480744 CLCNKBP51801 687 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 RAD51AP2Q09MP3 1159 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 RILPL1Q5EBL4 403 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 RINT1Q6NUQ1 792 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.74■□□□□ 0.27
LIMS3-203ENST00000480744 KCNK18Q7Z418 384 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 DAW1Q8N136 415 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 SIX5Q8N196 739 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 PPP1R10Q96QC0 940 aaKnown RBP16.74■□□□□ 0.27
LIMS3-203ENST00000480744 PLIN2Q99541 437 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 ACO2Q99798 780 aaKnown RBP16.74■□□□□ 0.27
LIMS3-203ENST00000480744 TCHPQ9BT92 498 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 MMTAG2Q9BU76 263 aaKnown RBP16.74■□□□□ 0.27
LIMS3-203ENST00000480744 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
LIMS3-203ENST00000480744 MRPL4Q9BYD3 311 aaKnown RBP16.74■□□□□ 0.27
LIMS3-203ENST00000480744 CDT1Q9H211 546 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 GOLGA2P5Q9HBQ8 144 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 EPS15L1Q9UBC2 864 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 FBXW11Q9UKB1 542 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 CACNA1HO95180 2353 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 MYH15Q9Y2K3 1946 aa16.74■□□□□ 0.27
LIMS3-203ENST00000480744 SFI1A8K8P3 1242 aa16.73■□□□□ 0.27
LIMS3-203ENST00000480744 SLC16A4O15374 487 aa16.73■□□□□ 0.27
LIMS3-203ENST00000480744 ADAM12O43184 909 aa16.73■□□□□ 0.27
LIMS3-203ENST00000480744 C8AP07357 584 aa16.73■□□□□ 0.27
LIMS3-203ENST00000480744 CFHP08603 1231 aa16.73■□□□□ 0.27
LIMS3-203ENST00000480744 GJB2P29033 226 aa16.73■□□□□ 0.27
LIMS3-203ENST00000480744 GRM5P41594 1212 aa16.73■□□□□ 0.27
LIMS3-203ENST00000480744 NUBP1P53384 320 aa16.73■□□□□ 0.27
LIMS3-203ENST00000480744 PPM1LQ5SGD2 360 aa16.73■□□□□ 0.27
LIMS3-203ENST00000480744 PDXDC1Q6P996 788 aa16.73■□□□□ 0.27
LIMS3-203ENST00000480744 ST13P5Q8NFI4 369 aaPredicted RBP16.73■□□□□ 0.27
LIMS3-203ENST00000480744 TMX3Q96JJ7 454 aa16.73■□□□□ 0.27
LIMS3-203ENST00000480744 TARS2Q9BW92 718 aaKnown RBP16.73■□□□□ 0.27
LIMS3-203ENST00000480744 TMEM134Q9H6X4 195 aa16.73■□□□□ 0.27
LIMS3-203ENST00000480744 TOPORSQ9NS56 1045 aaPredicted RBP16.73■□□□□ 0.27
LIMS3-203ENST00000480744 POLIQ9UNA4 740 aa16.73■□□□□ 0.27
LIMS3-203ENST00000480744 SMIM28A0A1B0GU29 152 aa16.72■□□□□ 0.27
LIMS3-203ENST00000480744 VWA3AA6NCI4 1184 aa16.72■□□□□ 0.27
LIMS3-203ENST00000480744 I3L4J1 428 aa16.72■□□□□ 0.27
LIMS3-203ENST00000480744 STK25O00506 426 aa16.72■□□□□ 0.27
LIMS3-203ENST00000480744 CCL16O15467 120 aa16.72■□□□□ 0.27
LIMS3-203ENST00000480744 RFX1P22670 979 aa16.72■□□□□ 0.27
LIMS3-203ENST00000480744 FSHRP23945 695 aa16.72■□□□□ 0.27
LIMS3-203ENST00000480744 IGFBP6P24592 240 aaPredicted RBP16.72■□□□□ 0.27
LIMS3-203ENST00000480744 OR1D2P34982 312 aa16.72■□□□□ 0.27
LIMS3-203ENST00000480744 CLCN5P51795 746 aa16.72■□□□□ 0.27
LIMS3-203ENST00000480744 ATP2C1P98194 919 aaPredicted RBP16.72■□□□□ 0.27
LIMS3-203ENST00000480744 MAPK7Q13164 816 aa16.72■□□□□ 0.27
LIMS3-203ENST00000480744 CWF19L1Q69YN2 538 aaKnown RBP16.72■□□□□ 0.27
LIMS3-203ENST00000480744 DCLRE1AQ6PJP8 1040 aa16.72■□□□□ 0.27
LIMS3-203ENST00000480744 C1orf186Q6ZWK4 172 aa16.72■□□□□ 0.27
LIMS3-203ENST00000480744 TAS1R3Q7RTX0 852 aa16.72■□□□□ 0.27
LIMS3-203ENST00000480744 GRASPQ7Z6J2 395 aaPredicted RBP16.72■□□□□ 0.27
LIMS3-203ENST00000480744 CDK5RAP3Q96JB5 506 aa16.72■□□□□ 0.27
LIMS3-203ENST00000480744 UROC1Q96N76 676 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms