RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 MRI1Q9BV20 369 aa6.85□□□□□ -1.31
CALD1-219ENST00000480638 CSRNP2Q9H175 543 aa6.85□□□□□ -1.31
CALD1-219ENST00000480638 AASDHPPTQ9NRN7 309 aa6.85□□□□□ -1.31
CALD1-219ENST00000480638 PCDHA13Q9Y5I0 950 aa6.85□□□□□ -1.31
CALD1-219ENST00000480638 TEX33O43247 280 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 ATP5JP18859 108 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 DDCP20711 480 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 MGAT1P26572 445 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 APOBEC3AP31941 199 aaPredicted RBP6.84□□□□□ -1.31
CALD1-219ENST00000480638 RAP2BP61225 183 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 DGCR2P98153 550 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 CDC42EP1Q00587 391 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 TARDBPQ13148 414 aaKnown RBP eCLIP6.84□□□□□ -1.31
CALD1-219ENST00000480638 IL10RAQ13651 578 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 RABL3Q5HYI8 236 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 OTUD7BQ6GQQ9 843 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 EFCAB12Q6NXP0 572 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 SYT12Q8IV01 421 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 PLEKHG4BQ96PX9 1271 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 ZNF747Q9BV97 191 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 VPS11Q9H270 941 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 TCF7L1Q9HCS4 588 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 TDP1Q9NUW8 608 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 PARPBPQ9NWS1 579 aa6.84□□□□□ -1.31
CALD1-219ENST00000480638 PNPLA7Q6ZV29 1317 aa6.83□□□□□ -1.32
CALD1-219ENST00000480638 LEFTY2O00292 366 aa6.83□□□□□ -1.32
CALD1-219ENST00000480638 TRIM24O15164 1050 aa6.83□□□□□ -1.32
CALD1-219ENST00000480638 SGTAO43765 313 aa6.83□□□□□ -1.32
CALD1-219ENST00000480638 AMHP03971 560 aa6.83□□□□□ -1.32
CALD1-219ENST00000480638 PIN1Q13526 163 aaPredicted RBP6.83□□□□□ -1.32
CALD1-219ENST00000480638 PLEKHG6Q3KR16 790 aa6.83□□□□□ -1.32
CALD1-219ENST00000480638 ODR4Q5SWX8 454 aa6.83□□□□□ -1.32
CALD1-219ENST00000480638 ATXN7L2Q5T6C5 722 aaPredicted RBP6.83□□□□□ -1.32
CALD1-219ENST00000480638 DRC7Q8IY82 874 aa6.83□□□□□ -1.32
CALD1-219ENST00000480638 ANKRD13AQ8IZ07 590 aa6.83□□□□□ -1.32
CALD1-219ENST00000480638 KAT5Q92993 513 aa6.83□□□□□ -1.32
CALD1-219ENST00000480638 HSPBAP1Q96EW2 488 aa6.83□□□□□ -1.32
CALD1-219ENST00000480638 POGKQ9P215 609 aa6.83□□□□□ -1.32
CALD1-219ENST00000480638 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.83□□□□□ -1.32
CALD1-219ENST00000480638 SLC23A1Q9UHI7 598 aa6.83□□□□□ -1.32
CALD1-219ENST00000480638 SORCS3Q9UPU3 1222 aa6.83□□□□□ -1.32
CALD1-219ENST00000480638 RUVBL1Q9Y265 456 aaKnown RBP6.83□□□□□ -1.32
CALD1-219ENST00000480638 FAM20BO75063 409 aa6.82□□□□□ -1.32
CALD1-219ENST00000480638 ABLIM3O94929 683 aa6.82□□□□□ -1.32
CALD1-219ENST00000480638 IL33O95760 270 aa6.82□□□□□ -1.32
CALD1-219ENST00000480638 PTTG1IPP53801 180 aa6.82□□□□□ -1.32
CALD1-219ENST00000480638 SLC25A3Q00325 362 aa6.82□□□□□ -1.32
CALD1-219ENST00000480638 CRIP3Q6Q6R5 217 aa6.82□□□□□ -1.32
CALD1-219ENST00000480638 SEM1Q6ZVN7 128 aa6.82□□□□□ -1.32
CALD1-219ENST00000480638 RSPH3Q86UC2 560 aa6.82□□□□□ -1.32
CALD1-219ENST00000480638 PLXDC1Q8IUK5 500 aa6.82□□□□□ -1.32
CALD1-219ENST00000480638 DCBLD1Q8N8Z6 715 aa6.82□□□□□ -1.32
CALD1-219ENST00000480638 TMX3Q96JJ7 454 aa6.82□□□□□ -1.32
CALD1-219ENST00000480638 MYOCQ99972 504 aa6.82□□□□□ -1.32
CALD1-219ENST00000480638 KRTAP4-9Q9BYQ8 210 aa6.82□□□□□ -1.32
CALD1-219ENST00000480638 IP6K2Q9UHH9 426 aa6.82□□□□□ -1.32
CALD1-219ENST00000480638 EIF2B4Q9UI10 523 aaKnown RBP6.82□□□□□ -1.32
CALD1-219ENST00000480638 CFAP20Q9Y6A4 193 aaKnown RBP6.82□□□□□ -1.32
CALD1-219ENST00000480638 E2F8A0AVK6 867 aa6.81□□□□□ -1.32
CALD1-219ENST00000480638 EPHB1P54762 984 aa6.81□□□□□ -1.32
CALD1-219ENST00000480638 CTXN1P60606 82 aa6.81□□□□□ -1.32
CALD1-219ENST00000480638 NHLH2Q02577 135 aa6.81□□□□□ -1.32
CALD1-219ENST00000480638 PPP4R3AQ6IN85 833 aa6.81□□□□□ -1.32
CALD1-219ENST00000480638 ZNF529Q6P280 563 aa6.81□□□□□ -1.32
CALD1-219ENST00000480638 IFI44Q8TCB0 444 aa6.81□□□□□ -1.32
CALD1-219ENST00000480638 THRAP3Q9Y2W1 955 aaKnown RBP6.81□□□□□ -1.32
CALD1-219ENST00000480638 CHST2Q9Y4C5 530 aa6.81□□□□□ -1.32
CALD1-219ENST00000480638 PCDHB1Q9Y5F3 818 aa6.81□□□□□ -1.32
CALD1-219ENST00000480638 DRGXA6NNA5 263 aa6.8□□□□□ -1.32
CALD1-219ENST00000480638 AKAP10O43572 662 aa6.8□□□□□ -1.32
CALD1-219ENST00000480638 RECQL4O94761 1208 aa6.8□□□□□ -1.32
CALD1-219ENST00000480638 SCAF4O95104 1147 aaKnown RBP6.8□□□□□ -1.32
CALD1-219ENST00000480638 PF4V1P10720 104 aa6.8□□□□□ -1.32
CALD1-219ENST00000480638 CHN2P52757 468 aa6.8□□□□□ -1.32
CALD1-219ENST00000480638 TUBA3CQ13748 450 aa6.8□□□□□ -1.32
CALD1-219ENST00000480638 LCE5AQ5TCM9 118 aa6.8□□□□□ -1.32
CALD1-219ENST00000480638 TUBA3EQ6PEY2 450 aa6.8□□□□□ -1.32
CALD1-219ENST00000480638 CPT1CQ8TCG5 803 aa6.8□□□□□ -1.32
CALD1-219ENST00000480638 NSUN6Q8TEA1 469 aaKnown RBP6.8□□□□□ -1.32
CALD1-219ENST00000480638 MRGPRX4Q96LA9 322 aa6.8□□□□□ -1.32
CALD1-219ENST00000480638 DCLRE1CQ96SD1 692 aaKnown RBP6.8□□□□□ -1.32
CALD1-219ENST00000480638 NEU1Q99519 415 aa6.8□□□□□ -1.32
CALD1-219ENST00000480638 NUP88Q99567 741 aaPredicted RBP6.8□□□□□ -1.32
CALD1-219ENST00000480638 RTFDC1Q9BY42 306 aaPredicted RBP6.8□□□□□ -1.32
CALD1-219ENST00000480638 ZNF341Q9BYN7 854 aa6.8□□□□□ -1.32
CALD1-219ENST00000480638 RHOBTB2Q9BYZ6 727 aa6.8□□□□□ -1.32
CALD1-219ENST00000480638 C11orf54Q9H0W9 315 aaPredicted RBP6.8□□□□□ -1.32
CALD1-219ENST00000480638 FBXO34Q9NWN3 711 aa6.8□□□□□ -1.32
CALD1-219ENST00000480638 FAM30AQ9NZY2 134 aa6.8□□□□□ -1.32
CALD1-219ENST00000480638 AHRRA9YTQ3 701 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 DIRC3C9JPN6 131 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 DTNBO60941 627 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 PEX11BO96011 259 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 POMCP01189 267 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 C6P13671 934 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 ZSCAN20P17040 1043 aaPredicted RBP6.79□□□□□ -1.32
CALD1-219ENST00000480638 TACR2P21452 398 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 RAB27AP51159 221 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 RNASE9P60153 205 aaKnown RBP6.79□□□□□ -1.32
CALD1-219ENST00000480638 DSC2Q02487 901 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms