RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 TUBGCP5Q96RT8 1024 aa11.34□□□□□ -0.59
SIK3-210ENST00000480468 TRAIPQ9BWF2 469 aa11.34□□□□□ -0.59
SIK3-210ENST00000480468 FOXP3Q9BZS1 431 aa11.34□□□□□ -0.59
SIK3-210ENST00000480468 DNAJC18Q9H819 358 aa11.34□□□□□ -0.59
SIK3-210ENST00000480468 BIN2Q9UBW5 565 aaPredicted RBP11.34□□□□□ -0.59
SIK3-210ENST00000480468 GYG2O15488 501 aa11.33□□□□□ -0.59
SIK3-210ENST00000480468 TROVE2P10155 538 aaKnown RBP eCLIP11.33□□□□□ -0.59
SIK3-210ENST00000480468 CRABP2P29373 138 aa11.33□□□□□ -0.59
SIK3-210ENST00000480468 CHRNDQ07001 517 aa11.33□□□□□ -0.59
SIK3-210ENST00000480468 ITGA9Q13797 1035 aa11.33□□□□□ -0.59
SIK3-210ENST00000480468 HNRNPDQ14103 355 aaKnown RBP11.33□□□□□ -0.59
SIK3-210ENST00000480468 DRAP1Q14919 205 aaPredicted RBP11.33□□□□□ -0.59
SIK3-210ENST00000480468 FAM91A1Q658Y4 838 aa11.33□□□□□ -0.59
SIK3-210ENST00000480468 RNF207Q6ZRF8 634 aa11.33□□□□□ -0.59
SIK3-210ENST00000480468 SEPT14Q6ZU15 432 aa11.33□□□□□ -0.59
SIK3-210ENST00000480468 MTDHQ86UE4 582 aaKnown RBP11.33□□□□□ -0.59
SIK3-210ENST00000480468 LARGE2Q8N3Y3 721 aa11.33□□□□□ -0.59
SIK3-210ENST00000480468 BBOF1Q8ND07 529 aa11.33□□□□□ -0.59
SIK3-210ENST00000480468 MCUR1Q96AQ8 359 aa11.33□□□□□ -0.59
SIK3-210ENST00000480468 LENG1Q96BZ8 264 aaPredicted RBP11.33□□□□□ -0.59
SIK3-210ENST00000480468 NSUN4Q96CB9 384 aaKnown RBP11.33□□□□□ -0.59
SIK3-210ENST00000480468 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.33□□□□□ -0.59
SIK3-210ENST00000480468 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.33□□□□□ -0.59
SIK3-210ENST00000480468 SCN7AQ01118 1682 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 TCRBV7S2A1N4TA0A589 114 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 FSCN2O14926 492 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 PLSCR1O15162 318 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 HAUS5O94927 633 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 GAS8O95995 478 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 NR3C1P04150 777 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 ITGA2BP08514 1039 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 COMTP21964 271 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 RFX1P22670 979 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 KCNJ1P48048 391 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 INHBCP55103 352 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 USP46P62068 366 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 PABPC4Q13310 644 aaKnown RBP eCLIP11.33□□□□□ -0.6
SIK3-210ENST00000480468 TNIP1Q15025 636 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 CCDC174Q6PII3 467 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 ACAD11Q709F0 780 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 OTOAQ7RTW8 1153 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 GRK7Q8WTQ7 553 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 SPOCK2Q92563 424 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 ECSITQ9BQ95 431 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 TMEM47Q9BQJ4 181 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 GPR88Q9GZN0 384 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 SSU72Q9NP77 194 aaKnown RBP11.33□□□□□ -0.6
SIK3-210ENST00000480468 METTL5Q9NRN9 209 aaKnown RBP11.33□□□□□ -0.6
SIK3-210ENST00000480468 ASIC3Q9UHC3 531 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 TBK1Q9UHD2 729 aa11.33□□□□□ -0.6
SIK3-210ENST00000480468 ZNF142P52746 1687 aaPredicted RBP11.32□□□□□ -0.6
SIK3-210ENST00000480468 MAGEC1O60732 1142 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 ZCCHC18P0CG32 403 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 CHRNB2P17787 502 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 ABCD1P33897 745 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 HOXD13P35453 343 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 ITGA8P53708 1063 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 GPC5P78333 572 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 SULT2A1Q06520 285 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 RASA2Q15283 850 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 CERKLQ49MI3 558 aaPredicted RBP11.32□□□□□ -0.6
SIK3-210ENST00000480468 TMEM259Q4ZIN3 620 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 C12orf60Q5U649 245 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 TCERG1LQ5VWI1 586 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 VPS52Q8N1B4 723 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 PLVAPQ9BX97 442 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 PPCSQ9HAB8 311 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 TMEM260Q9NX78 707 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 ZDHHC7Q9NXF8 308 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 TAS2R14Q9NYV8 317 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 ANKFY1Q9P2R3 1169 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 DNAJC12Q9UKB3 198 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 TOGARAM1Q9Y4F4 1720 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 ATP6V1G1O75348 118 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 VAV1P15498 845 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 NEK3P51956 506 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 MAP3K10Q02779 954 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 UBE4AQ14139 1066 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 GRM2Q14416 872 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 TMED2Q15363 201 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 NFIL3Q16649 462 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 SPATA24Q86W54 205 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 MYLK4Q86YV6 388 aaPredicted RBP11.32□□□□□ -0.6
SIK3-210ENST00000480468 TRIM42Q8IWZ5 723 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 LRRC43Q8N309 656 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 WDR60Q8WVS4 1066 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 HAS1Q92839 578 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 VTI1AQ96AJ9 217 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 AGPAT1Q99943 283 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 TRABDQ9H4I3 376 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 ARL8BQ9NVJ2 186 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 PTTG2Q9NZH5 202 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 ANAPC5Q9UJX4 755 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 GRID1Q9ULK0 1009 aa11.32□□□□□ -0.6
SIK3-210ENST00000480468 E9PMD0 336 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 PFDN1O60925 122 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 ATF2P15336 505 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 RGS2P41220 211 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 ADCY7P51828 1080 aa11.31□□□□□ -0.6
SIK3-210ENST00000480468 CASP5P51878 434 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms