RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 MICAL3Q7RTP6 2002 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 USP34Q70CQ2 3546 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 B4GALT3O60512 393 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 STAG3L1P0CL83 205 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 HARSP12081 509 aaKnown RBP13.35□□□□□ -0.27
TRA2B-212ENST00000480461 ITGA4P13612 1032 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 GRM5P41594 1212 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 ACOT2P49753 483 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 RAB27AP51159 221 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 WNT7BP56706 349 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 KLHL40Q2TBA0 621 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 SLC10A6Q3KNW5 377 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 ZCWPW2Q504Y3 356 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 CENPPQ6IPU0 288 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 PTCRAQ6ISU1 281 aaPredicted RBP13.35□□□□□ -0.27
TRA2B-212ENST00000480461 CAVIN1Q6NZI2 390 aaKnown RBP13.35□□□□□ -0.27
TRA2B-212ENST00000480461 TMEM130Q8N3G9 435 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 HELQQ8TDG4 1101 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 CCDC47Q96A33 483 aaKnown RBP13.35□□□□□ -0.27
TRA2B-212ENST00000480461 SAAL1Q96ER3 474 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 GAD1Q99259 594 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 RAD9AQ99638 391 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 GBP3Q9H0R5 595 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 DMAC2Q9NW81 257 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 PLAGL2Q9UPG8 496 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 EXOC7Q9UPT5 735 aa13.35□□□□□ -0.27
TRA2B-212ENST00000480461 LINC01553A4QN01 128 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 GOLGA8IPA6NC78 632 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 ARL5CA6NH57 179 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 GOLGA8JA6NMD2 632 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 PDXKO00764 312 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 PTGESO14684 152 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 OGTO15294 1046 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 DCXO43602 365 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 RECQL4O94761 1208 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 ADRB2P07550 413 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 SKIP12755 728 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 GARTP22102 1010 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 ERVK-21P61565 698 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 NOLC1Q14978 699 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRA2B-212ENST00000480461 ENOX2Q16206 610 aaKnown RBP13.34□□□□□ -0.27
TRA2B-212ENST00000480461 DCAF4L1Q3SXM0 396 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 XKR4Q5GH76 650 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 CCDC183Q5T5S1 534 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 ANKRD40Q6AI12 368 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 SLFN12LQ6IEE8 588 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 STXBP4Q6ZWJ1 553 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 ZNF280BQ86YH2 543 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 SP7Q8TDD2 431 aaPredicted RBP13.34□□□□□ -0.27
TRA2B-212ENST00000480461 POMGNT1Q8WZA1 660 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 ZMAT2Q96NC0 199 aaKnown RBP13.34□□□□□ -0.27
TRA2B-212ENST00000480461 TGS1Q96RS0 853 aaKnown RBP13.34□□□□□ -0.27
TRA2B-212ENST00000480461 ADPGKQ9BRR6 497 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 MSTO1Q9BUK6 570 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 TRIM6Q9C030 488 aaPredicted RBP13.34□□□□□ -0.27
TRA2B-212ENST00000480461 PARP2Q9UGN5 583 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 CPSF3Q9UKF6 684 aaKnown RBP13.34□□□□□ -0.27
TRA2B-212ENST00000480461 AGO2Q9UKV8 859 aaKnown RBP13.34□□□□□ -0.27
TRA2B-212ENST00000480461 LRFN2Q9ULH4 789 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 TRAF3IP3Q9Y228 551 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 UBE4BO95155 1302 aa13.34□□□□□ -0.27
TRA2B-212ENST00000480461 GRXCR2A6NFK2 248 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 TBKBP1A7MCY6 615 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 INPPL1O15357 1258 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 DDHD2O94830 711 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 IGFBP6P24592 240 aaPredicted RBP13.33□□□□□ -0.28
TRA2B-212ENST00000480461 MLH1P40692 756 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 MATR3P43243 847 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRA2B-212ENST00000480461 NAB2Q15742 525 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 DPCR1Q3MIW9 517 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 PAN2Q504Q3 1202 aaKnown RBP13.33□□□□□ -0.28
TRA2B-212ENST00000480461 SCARA3Q6AZY7 606 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 C12orf56Q8IXR9 622 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 TRIML1Q8N9V2 468 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 TMEM174Q8WUU8 243 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 PGBD4Q96DM1 585 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 EEF2KMTQ96G04 330 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 ACAP3Q96P50 834 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 DUSP9Q99956 384 aaKnown RBP13.33□□□□□ -0.28
TRA2B-212ENST00000480461 FAM213AQ9BRX8 229 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 ZBED2Q9BTP6 218 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 TMEM117Q9H0C3 514 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 GZF1Q9H116 711 aaPredicted RBP13.33□□□□□ -0.28
TRA2B-212ENST00000480461 CWH43Q9H720 699 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 RSAD1Q9HA92 442 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 TYW1Q9NV66 732 aaKnown RBP13.33□□□□□ -0.28
TRA2B-212ENST00000480461 HSPBP1Q9NZL4 362 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 GIT1Q9Y2X7 761 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 INSL6Q9Y581 213 aa13.33□□□□□ -0.28
TRA2B-212ENST00000480461 TTC26A0AVF1 554 aa13.32□□□□□ -0.28
TRA2B-212ENST00000480461 TRIM49BA6NDI0 452 aa13.32□□□□□ -0.28
TRA2B-212ENST00000480461 LACTBL1A8MY62 500 aa13.32□□□□□ -0.28
TRA2B-212ENST00000480461 POMCP01189 267 aa13.32□□□□□ -0.28
TRA2B-212ENST00000480461 CLTAP09496 248 aa13.32□□□□□ -0.28
TRA2B-212ENST00000480461 CXCL8P10145 99 aa13.32□□□□□ -0.28
TRA2B-212ENST00000480461 CASP4P49662 377 aa13.32□□□□□ -0.28
TRA2B-212ENST00000480461 NLRP12P59046 1061 aa13.32□□□□□ -0.28
TRA2B-212ENST00000480461 SPAG1Q07617 926 aa13.32□□□□□ -0.28
TRA2B-212ENST00000480461 NOMO2Q5JPE7 1267 aa13.32□□□□□ -0.28
TRA2B-212ENST00000480461 ARMCX5Q6P1M9 558 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms