RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SKIV2L2P42285 1042 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 CARSP49589 748 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 KRT17Q04695 432 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 EPS8Q12929 822 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 NT5DC1Q5TFE4 455 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 DDHD1Q8NEL9 900 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ZNF560Q96MR9 790 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 IRX2Q9BZI1 471 aaPredicted RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 PARVBQ9HBI1 364 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 PAPOLBQ9NRJ5 636 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ATP11BQ9Y2G3 1177 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 AP3M1Q9Y2T2 418 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 FRMD3A2A2Y4 597 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 H2AFYO75367 372 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 PLEKHA8P1O95397 391 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 MAP4P27816 1152 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 CCND2P30279 289 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 PHKA2P46019 1235 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ROR1Q01973 937 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 RIPK1Q13546 671 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ZCWPW2Q504Y3 356 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 EFHC2Q5JST6 749 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 C12orf60Q5U649 245 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ARHGEF26Q96DR7 871 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 TNIP3Q96KP6 325 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 VPS11Q9H270 941 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 MRPL46Q9H2W6 279 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ZWILCHQ9H900 591 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ANKEF1Q9NU02 776 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 DCTN4Q9UJW0 460 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 PRR36Q9H6K5 1346 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 TRIM49BA6NDI0 452 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 TRPC5OSA6NMA1 111 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 GAS2O43903 313 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 FDPSP14324 419 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 TNFRSF8P28908 595 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 S100A5P33763 92 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 MAGEA4P43358 317 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 GCLMP48507 274 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ZNF200P98182 395 aaPredicted RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 STK4Q13043 487 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 NCAPHQ15003 741 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 XKR3Q5GH77 459 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 LRRC8EQ6NSJ5 796 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 RNF139Q8WU17 664 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 C18orf8Q96DM3 657 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 RBBP8Q99708 897 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ZNF219Q9P2Y4 722 aaPredicted RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 DMGDHQ9UI17 866 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 TEKT2Q9UIF3 430 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 GINS2Q9Y248 185 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 PCDHA10Q9Y5I2 948 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ADGRA3Q8IWK6 1321 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ANKRD65E5RJM6 399 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 M0R3G1 203 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 COBLO75128 1261 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 SNUPNO95149 360 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 CSF1RP07333 972 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 KLRC1P26715 233 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 PCNX4Q63HM2 1172 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 C11orf63Q6NUN7 778 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ASAP3Q8TDY4 903 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 E2F7Q96AV8 911 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 VCPIP1Q96JH7 1222 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 MAGEB18Q96M61 343 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 FAM210AQ96ND0 272 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 PRPF18Q99633 342 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 FAM167BQ9BTA0 163 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 TMBIM4Q9HC24 238 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 PCDHA6Q9UN73 950 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 NEU2Q9Y3R4 380 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 PCDHA8Q9Y5H6 950 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ZNF839A8K0R7 811 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 RBP3P10745 1247 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 SERPINB1P30740 379 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 GTF2H1P32780 548 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 MTF1Q14872 753 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ARHGEF6Q15052 776 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 GSTA3Q16772 222 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 KLHDC7AQ5VTJ3 777 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ZFP1Q6P2D0 407 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 USP17L2Q6R6M4 530 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 PATL1Q86TB9 770 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 TMPRSS6Q8IU80 811 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 TNIP2Q8NFZ5 429 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 MAGEC3Q8TD91 643 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 LRRC39Q96DD0 335 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ZFRQ96KR1 1074 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 TBCBQ99426 244 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 ZSWIM1Q9BR11 485 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 EFCAB1Q9HAE3 211 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 HDAC6Q9UBN7 1215 aa6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 TTC7AQ9ULT0 858 aaPredicted RBP6.48□□□□□ -1.37
PRPF4B-205ENST00000480058 TM9SF1O15321 606 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 EFCAB14O75071 495 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 RPS6KA4O75676 772 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 RASSF9O75901 435 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 MYO1DO94832 1006 aa6.47□□□□□ -1.37
PRPF4B-205ENST00000480058 HSD17B4P51659 736 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms