RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 LBHD1Q9BQE6 289 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 RBSNQ9H1K0 784 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 RPF1Q9H9Y2 349 aaKnown RBP13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 SNTG2Q9NY99 539 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 HES2Q9Y543 173 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 CEP290O15078 2479 aa13.63□□□□□ -0.23
TRAPPC12-218ENST00000479897 KCNJ18B7U540 433 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 HOXA2O43364 376 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 KRT13P13646 458 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 KCNE1P15382 129 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 WDR5P61964 334 aaKnown RBP13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 KCNJ12Q14500 433 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 SEZ6Q53EL9 994 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 TMEM240Q5SV17 173 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 RNF214Q8ND24 703 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 PLEKHO2Q8TD55 490 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 HERVK_113Q902F9 699 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 SLC35C1Q96A29 364 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 CGRRF1Q99675 332 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 RNF39Q9H2S5 420 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 RSAD1Q9HA92 442 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 MAGEC2Q9UBF1 373 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 LIMA1Q9UHB6 759 aaKnown RBP13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 DERAQ9Y315 318 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 C2CD2Q9Y426 696 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 PDE4DIPQ5VU43 2346 aa13.62□□□□□ -0.23
TRAPPC12-218ENST00000479897 LRRC10BA6NIK2 292 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 RBAK-RBAKDNI3L0D1 243 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 FGBP02675 491 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 AMHP03971 560 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 ACRP10323 421 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 VAMP7P51809 220 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 AP3M2P53677 418 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 EPHB4P54760 987 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 WNT7BP56706 349 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 OSTNP61366 133 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 MAN2A1Q16706 1144 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 UVSSAQ2YD98 709 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 C1orf220Q5T0J3 134 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 RASIP1Q5U651 963 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 ZNF365Q70YC5 407 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 APTXQ7Z2E3 356 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 WDR49Q8IV35 697 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 RDH13Q8NBN7 331 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 ANKRD20A12PQ8NF67 263 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.61□□□□□ -0.231e-7■■□□□ 13.8
TRAPPC12-218ENST00000479897 RC3H2Q9HBD1 1191 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 RNF19AQ9NV58 838 aa13.61□□□□□ -0.23
TRAPPC12-218ENST00000479897 FSD2A1L4K1 749 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 LRRIQ3A6PVS8 624 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 MEIS3P2A8K0S8 358 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 LACTBL1A8MY62 500 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 PMM2O15305 246 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 STX10O60499 249 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 ATP1A3P13637 1013 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 AKAP5P24588 427 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 GTF2H1P32780 548 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 MAGEA10P43363 369 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 KCNJ6P48051 423 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 KRT31Q15323 416 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 EFCAB13Q8IY85 973 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 GSTCDQ8NEC7 633 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 LPPQ93052 612 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 TOP1MTQ969P6 601 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 FNBP1Q96RU3 617 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 TUBGCP2Q9BSJ2 902 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 APOL6Q9BWW8 343 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 MTIF3Q9H2K0 278 aaKnown RBP13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 PDE11AQ9HCR9 933 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 PARP2Q9UGN5 583 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 PCDHB7Q9Y5E2 793 aa13.6□□□□□ -0.23
TRAPPC12-218ENST00000479897 ARL5CA6NH57 179 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 PTGESO14684 152 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 P4HA2O15460 535 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 N4BP1O75113 896 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 OFD1O75665 1012 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 CYP3A5P20815 502 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 MLH1P40692 756 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 MTIF2P46199 727 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 DLG4P78352 724 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 DEFB103AP81534 67 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 GRIK3Q13003 919 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 ZBTB6Q15916 424 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 HSP90AA4PQ58FG1 418 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 MIIPQ5JXC2 388 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 CLLU1OSQ5K130 101 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 SARM1Q6SZW1 724 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 GLB1LQ6UWU2 654 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 C15orf39Q6ZRI6 1047 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 PPP1R10Q96QC0 940 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 RPS6KC1Q96S38 1066 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 SLC9A7Q96T83 725 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 GDF15Q99988 308 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 TMEM117Q9H0C3 514 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 INTS13Q9NVM9 706 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 PCDH10Q9P2E7 1040 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 LRFN2Q9ULH4 789 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms