RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 Q4G0T1 1027 aa13.86□□□□□ -0.19
LYSMD4-206ENST00000479791 SLC45A4Q5BKX6 768 aa13.86□□□□□ -0.19
LYSMD4-206ENST00000479791 PPP1R15BQ5SWA1 713 aa13.86□□□□□ -0.19
LYSMD4-206ENST00000479791 TBC1D9BQ66K14 1250 aa13.86□□□□□ -0.19
LYSMD4-206ENST00000479791 USP17L6PQ6QN14 398 aa13.86□□□□□ -0.19
LYSMD4-206ENST00000479791 HS2ST1Q7LGA3 356 aa13.86□□□□□ -0.19
LYSMD4-206ENST00000479791 LRRC8CQ8TDW0 803 aa13.86□□□□□ -0.19
LYSMD4-206ENST00000479791 C10orf82Q8WW14 230 aa13.86□□□□□ -0.19
LYSMD4-206ENST00000479791 C1orf54Q8WWF1 131 aa13.86□□□□□ -0.19
LYSMD4-206ENST00000479791 PSPC1Q8WXF1 523 aaKnown RBP13.86□□□□□ -0.19
LYSMD4-206ENST00000479791 CRYGNQ8WXF5 182 aa13.86□□□□□ -0.19
LYSMD4-206ENST00000479791 PIDD1Q9HB75 910 aa13.86□□□□□ -0.19
LYSMD4-206ENST00000479791 NMRK1Q9NWW6 199 aa13.86□□□□□ -0.19
LYSMD4-206ENST00000479791 A0A1W2PRG0 241 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 FAM170AA1A519 330 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 CLDN3O15551 220 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 ABHD2P08910 425 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 SKIP12755 728 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 ATF2P15336 505 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 PDK4Q16654 411 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 ZNF564Q8TBZ8 553 aaPredicted RBP13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 KIFAP3Q92845 792 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 BICD1Q96G01 975 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 PAIP2Q9BPZ3 127 aaKnown RBP13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 POLR3CQ9BUI4 534 aaPredicted RBP13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 BTG4Q9NY30 223 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 RABGAP1Q9Y3P9 1069 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 ROBO1Q9Y6N7 1651 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 CYP1A2P05177 515 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 TRIM49P0CI25 452 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 TRIM49CP0CI26 452 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 RFC5P40937 340 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 AP3B2Q13367 1082 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 TNIP1Q15025 636 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 TTBK2Q6IQ55 1244 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 RINT1Q6NUQ1 792 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 ZNF449Q6P9G9 518 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 C4orf50Q6ZRC1 276 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 DRAXINQ8NBI3 349 aaPredicted RBP13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 BBOF1Q8ND07 529 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 FAM20AQ96MK3 541 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 BCAS3Q9H6U6 928 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 UVRAGQ9P2Y5 699 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 USP17L10C9JJH3 530 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 FAM13AO94988 1023 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 BFSP1Q12934 665 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 TRABD2AQ86V40 505 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 NUP85Q9BW27 656 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 UBE2TQ9NPD8 197 aaPredicted RBP13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 DNAJC17Q9NVM6 304 aaKnown RBP13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 RGL1Q9NZL6 768 aa13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 SMG5Q9UPR3 1016 aaKnown RBP13.85□□□□□ -0.19
LYSMD4-206ENST00000479791 SPATA31A5Q5VU36 1347 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 SPATA31A6Q5VVP1 1343 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 SPATA31A7Q8IWB4 1347 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 CBX6O95503 412 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 NMT1P30419 496 aaKnown RBP13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 SSR1P43307 286 aaKnown RBP13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 ARHGAP4P98171 946 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 ADCY1Q08828 1119 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 PRR16Q569H4 304 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 RNF220Q5VTB9 566 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 CEP128Q6ZU80 1094 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 MYCT1Q8N699 235 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 ZNF398Q8TD17 642 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 TRIM4Q9C037 500 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 TMX4Q9H1E5 349 aaPredicted RBP13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 IKZF4Q9H2S9 585 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 AGPAT3Q9NRZ7 376 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 C2CD2LO14523 706 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 RGL2O15211 777 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 ADCY8P40145 1251 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 RHBDL3P58872 404 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 ZRSR2Q15696 482 aaKnown RBP13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 ZC2HC1CQ53FD0 456 aaPredicted RBP13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 STXBP4Q6ZWJ1 553 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 ATL2Q8NHH9 583 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 PCDHB18PQ96TA0 734 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 NYXQ9GZU5 481 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 SLCO1B3Q9NPD5 702 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 CYLDQ9NQC7 956 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 CHST7Q9NS84 486 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 SENP1Q9P0U3 644 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 SEL1LQ9UBV2 794 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 CHORDC1Q9UHD1 332 aaPredicted RBP13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 GTF3C4Q9UKN8 822 aa13.84□□□□□ -0.19
LYSMD4-206ENST00000479791 SFI1A8K8P3 1242 aa13.83□□□□□ -0.19
LYSMD4-206ENST00000479791 CDR2Q01850 454 aa13.83□□□□□ -0.19
LYSMD4-206ENST00000479791 CETN1Q12798 172 aa13.83□□□□□ -0.19
LYSMD4-206ENST00000479791 COG2Q14746 738 aa13.83□□□□□ -0.19
LYSMD4-206ENST00000479791 TMED2Q15363 201 aa13.83□□□□□ -0.19
LYSMD4-206ENST00000479791 KHDC1Q4VXA5 237 aaKnown RBP13.83□□□□□ -0.19
LYSMD4-206ENST00000479791 TAF1BQ53T94 588 aaPredicted RBP13.83□□□□□ -0.19
LYSMD4-206ENST00000479791 SNX30Q5VWJ9 437 aa13.83□□□□□ -0.19
LYSMD4-206ENST00000479791 ZNF746Q6NUN9 644 aaPredicted RBP13.83□□□□□ -0.19
LYSMD4-206ENST00000479791 TDRPQ86YL5 185 aa13.83□□□□□ -0.19
LYSMD4-206ENST00000479791 SLC9A9Q8IVB4 645 aa13.83□□□□□ -0.19
LYSMD4-206ENST00000479791 LENG9Q96B70 501 aa13.83□□□□□ -0.19
LYSMD4-206ENST00000479791 FOXP3Q9BZS1 431 aa13.83□□□□□ -0.19
LYSMD4-206ENST00000479791 PARVGQ9HBI0 331 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms