RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 SPATA20Q8TB22 786 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 ELP3Q9H9T3 547 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 KRT7P08729 469 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 SH2D3CQ8N5H7 860 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 LRRN4CLQ8ND94 238 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 TNFRSF25Q93038 417 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 HLA-DRAP01903 254 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 COMTP21964 271 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 TM4SF1P30408 202 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 WDR72Q3MJ13 1102 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 ZNF449Q6P9G9 518 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 FASTKD5Q7L8L6 764 aaKnown RBP15.22■□□□□ 0.03
COL20A1-206ENST00000479501 SIX6OS1Q8N1H7 587 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 ZKSCAN4Q969J2 545 aaPredicted RBP15.22■□□□□ 0.03
COL20A1-206ENST00000479501 CBWD1Q9BRT8 395 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 PACSIN1Q9BY11 444 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 NALCNQ8IZF0 1738 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 LMO7Q8WWI1 1683 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 CRCPO75575 148 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 ARL4CP56559 192 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 NFX1Q12986 1120 aaKnown RBP15.22■□□□□ 0.03
COL20A1-206ENST00000479501 MXD4Q14582 209 aaPredicted RBP15.22■□□□□ 0.03
COL20A1-206ENST00000479501 MKL1Q969V6 931 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 MAP3K20Q9NYL2 800 aaKnown RBP15.22■□□□□ 0.03
COL20A1-206ENST00000479501 TRAF3IP3Q9Y228 551 aa15.22■□□□□ 0.03
COL20A1-206ENST00000479501 ASB14A6NK59 587 aa15.21■□□□□ 0.03
COL20A1-206ENST00000479501 PPFIA2O75334 1257 aa15.21■□□□□ 0.03
COL20A1-206ENST00000479501 LRRC23Q53EV4 343 aaPredicted RBP15.21■□□□□ 0.03
COL20A1-206ENST00000479501 TARS2Q9BW92 718 aaKnown RBP15.21■□□□□ 0.03
COL20A1-206ENST00000479501 TCHHQ07283 1943 aa15.21■□□□□ 0.03
COL20A1-206ENST00000479501 M0QYV0 167 aa15.21■□□□□ 0.03
COL20A1-206ENST00000479501 CRY2Q49AN0 593 aa15.21■□□□□ 0.03
COL20A1-206ENST00000479501 DDX42Q86XP3 938 aaKnown RBP eCLIP15.21■□□□□ 0.03
COL20A1-206ENST00000479501 SRRM1Q8IYB3 904 aaKnown RBP15.21■□□□□ 0.03
COL20A1-206ENST00000479501 CARD9Q9H257 536 aa15.21■□□□□ 0.03
COL20A1-206ENST00000479501 RASA4BC9J798 803 aa15.21■□□□□ 0.02
COL20A1-206ENST00000479501 RASA4O43374 803 aa15.21■□□□□ 0.02
COL20A1-206ENST00000479501 KRT14P02533 472 aa15.21■□□□□ 0.02
COL20A1-206ENST00000479501 ACTR2P61160 394 aa15.21■□□□□ 0.02
COL20A1-206ENST00000479501 KRT17Q04695 432 aa15.21■□□□□ 0.02
COL20A1-206ENST00000479501 DBN1Q16643 649 aa15.21■□□□□ 0.02
COL20A1-206ENST00000479501 NLRP14Q86W24 1093 aa15.21■□□□□ 0.02
COL20A1-206ENST00000479501 ATL2Q8NHH9 583 aa15.21■□□□□ 0.02
COL20A1-206ENST00000479501 PI4K2AQ9BTU6 479 aa15.21■□□□□ 0.02
COL20A1-206ENST00000479501 FAM198AQ9UFP1 575 aa15.21■□□□□ 0.02
COL20A1-206ENST00000479501 PHF2O75151 1096 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 ABL1P00519 1130 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 CBWD2Q8IUF1 395 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 RBBP8NLQ8NC74 664 aaPredicted RBP15.2■□□□□ 0.02
COL20A1-206ENST00000479501 SNF8Q96H20 258 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 FAM193BQ96PV7 902 aaPredicted RBP15.2■□□□□ 0.02
COL20A1-206ENST00000479501 MRIQ9BWK5 157 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 DMGDHQ9UI17 866 aaKnown RBP15.2■□□□□ 0.02
COL20A1-206ENST00000479501 GPS1Q13098 491 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 OTOP1Q7RTM1 612 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 ZNF571Q7Z3V5 609 aaPredicted RBP15.2■□□□□ 0.02
COL20A1-206ENST00000479501 CHST13Q8NET6 341 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 SYTL5Q8TDW5 730 aaPredicted RBP15.2■□□□□ 0.02
COL20A1-206ENST00000479501 YIPF3Q9GZM5 350 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 THAP2Q9H0W7 228 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 KLC4Q9NSK0 619 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 ATMINO43313 823 aaPredicted RBP15.2■□□□□ 0.02
COL20A1-206ENST00000479501 SLITRK3O94933 977 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 GARSP41250 739 aaKnown RBP15.2■□□□□ 0.02
COL20A1-206ENST00000479501 BACE1P56817 501 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 FKBP1AP62942 108 aaKnown RBP15.2■□□□□ 0.02
COL20A1-206ENST00000479501 MEA1Q16626 185 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 DEFB132Q7Z7B7 95 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 DNAAF3Q8N9W5 541 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 HAS1Q92839 578 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 PFDN4Q9NQP4 134 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 GIPC1O14908 333 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 RFC5P40937 340 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 GUCY1A3Q02108 690 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 SPDYE2Q495Y8 402 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 EPC2Q52LR7 807 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 ZNF507Q8TCN5 953 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 PDCD2LQ9BRP1 358 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 CHORDC1Q9UHD1 332 aaPredicted RBP15.2■□□□□ 0.02
COL20A1-206ENST00000479501 HEY1Q9Y5J3 304 aa15.2■□□□□ 0.02
COL20A1-206ENST00000479501 GTPBP10A4D1E9 387 aaKnown RBP15.19■□□□□ 0.02
COL20A1-206ENST00000479501 H0Y3Z8 333 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 SDC4P31431 198 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 METTL23Q86XA0 190 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 FAF2Q96CS3 445 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 MTMR8Q96EF0 704 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL20A1-206ENST00000479501 GOLGA8MH3BSY2 632 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 MEFVO15553 781 aaPredicted RBP15.19■□□□□ 0.02
COL20A1-206ENST00000479501 EXTL3O43909 919 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 PPP1R37O75864 691 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 SLURP2P0DP57 97 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 SAT1P21673 171 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 MRPS9P82933 396 aaKnown RBP15.19■□□□□ 0.02
COL20A1-206ENST00000479501 TAP1Q03518 808 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 FAM102AQ5T9C2 384 aaPredicted RBP15.19■□□□□ 0.02
COL20A1-206ENST00000479501 IZUMO3Q5VZ72 239 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 TTC39CQ8N584 583 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 SAMD3Q8N6K7 520 aa15.19■□□□□ 0.02
COL20A1-206ENST00000479501 BEST2Q8NFU1 509 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms