RNA–Protein interactions for RNA: ENST00000479487.1

ATRX-205, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-205ENST00000479487 SHANK2Q9UPX8 1470 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 PIK3C2GO75747 1445 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 A0A1W2PRX2 142 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 ANKRD62A6NC57 917 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 ALG1L2C9J202 215 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 ALDH1A2O94788 518 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 PEX11BO96011 259 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 GASTP01350 101 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 ZSCAN20P17040 1043 aaPredicted RBP3.54□□□□□ -1.84
ATRX-205ENST00000479487 HIBADHP31937 336 aaKnown RBP3.54□□□□□ -1.84
ATRX-205ENST00000479487 GPR3P46089 330 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 LGALS4P56470 323 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 SLC20A2Q08357 652 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 TUBA3CQ13748 450 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 MUM1Q2TAK8 710 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 NAIF1Q69YI7 327 aaPredicted RBP3.54□□□□□ -1.84
ATRX-205ENST00000479487 TUBA3EQ6PEY2 450 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 LMBR1LQ6UX01 489 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 SKAP1Q86WV1 359 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 DNAJC10Q8IXB1 793 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 ANKRD35Q8N283 1001 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 ZCRB1Q8TBF4 217 aaKnown RBP3.54□□□□□ -1.84
ATRX-205ENST00000479487 TSPEARQ8WU66 669 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 SNX33Q8WV41 574 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 AUTS2Q8WXX7 1259 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 EAF2Q96CJ1 260 aaPredicted RBP3.54□□□□□ -1.84
ATRX-205ENST00000479487 ZG16BQ96DA0 208 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 AHCYL2Q96HN2 611 aaKnown RBP3.54□□□□□ -1.84
ATRX-205ENST00000479487 OR14A2Q96R54 314 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 TCF25Q9BQ70 676 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 ZNF703Q9H7S9 590 aaPredicted RBP3.54□□□□□ -1.84
ATRX-205ENST00000479487 VTA1Q9NP79 307 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 ZNF277Q9NRM2 450 aaPredicted RBP3.54□□□□□ -1.84
ATRX-205ENST00000479487 USP18Q9UMW8 372 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 NOL7Q9UMY1 257 aaKnown RBP3.54□□□□□ -1.84
ATRX-205ENST00000479487 GRIN2AQ12879 1464 aa3.54□□□□□ -1.84
ATRX-205ENST00000479487 CDC42BPAQ5VT25 1732 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 KDM5AP29375 1690 aaKnown RBP3.53□□□□□ -1.84
ATRX-205ENST00000479487 ZNF521Q96K83 1311 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 PLIN1O60240 522 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 PHF2O75151 1096 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 HSP90AB1P08238 724 aaKnown RBP3.53□□□□□ -1.84
ATRX-205ENST00000479487 CLEC2LP0C7M8 214 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 GYPEP15421 78 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 ACRV1P26436 265 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 MSX2P35548 267 aaPredicted RBP3.53□□□□□ -1.84
ATRX-205ENST00000479487 HMGN5P82970 282 aaKnown RBP3.53□□□□□ -1.84
ATRX-205ENST00000479487 HNRNPA0Q13151 305 aaKnown RBP3.53□□□□□ -1.84
ATRX-205ENST00000479487 KLF1Q13351 362 aaPredicted RBP3.53□□□□□ -1.84
ATRX-205ENST00000479487 CT83Q5H943 113 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 DCAF17Q5H9S7 520 aaPredicted RBP3.53□□□□□ -1.84
ATRX-205ENST00000479487 FAM111BQ6SJ93 734 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 BTNL9Q6UXG8 535 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 DOK3Q7L591 496 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 APBB1IPQ7Z5R6 666 aaPredicted RBP3.53□□□□□ -1.84
ATRX-205ENST00000479487 SGMS1Q86VZ5 419 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 ZNF575Q86XF7 245 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 CBARPQ8N350 705 aaPredicted RBP3.53□□□□□ -1.84
ATRX-205ENST00000479487 NGEFQ8N5V2 710 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 ATL2Q8NHH9 583 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 EXTL1Q92935 676 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 FATE1Q969F0 183 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 MIEF2Q96C03 454 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 NAF1Q96HR8 494 aaKnown RBP3.53□□□□□ -1.84
ATRX-205ENST00000479487 CRAMP1Q96RY5 1269 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 TSPYL1Q9H0U9 437 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 CHMP4BQ9H444 224 aaKnown RBP3.53□□□□□ -1.84
ATRX-205ENST00000479487 PCDH12Q9NPG4 1184 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 CCM2LQ9NUG4 571 aaPredicted RBP3.53□□□□□ -1.84
ATRX-205ENST00000479487 C14orf119Q9NWQ9 140 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 SLC5A4Q9NY91 659 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 HECAQ9UBI9 543 aaPredicted RBP3.53□□□□□ -1.84
ATRX-205ENST00000479487 ING1Q9UK53 422 aaPredicted RBP3.53□□□□□ -1.84
ATRX-205ENST00000479487 GIT1Q9Y2X7 761 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 SH3BP1Q9Y3L3 701 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 LAMC3Q9Y6N6 1575 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 CCDC141Q6ZP82 1450 aa3.53□□□□□ -1.84
ATRX-205ENST00000479487 CEP152O94986 1710 aa3.53□□□□□ -1.85
ATRX-205ENST00000479487 ABCC5O15440 1437 aa3.53□□□□□ -1.85
ATRX-205ENST00000479487 NUP160Q12769 1436 aa3.53□□□□□ -1.85
ATRX-205ENST00000479487 GPRASP1Q5JY77 1395 aa3.52□□□□□ -1.85
ATRX-205ENST00000479487 RPTORQ8N122 1335 aa3.52□□□□□ -1.85
ATRX-205ENST00000479487 UBE2QL1A1L167 161 aa3.52□□□□□ -1.85
ATRX-205ENST00000479487 TMEM191CA6NGB0 347 aa3.52□□□□□ -1.85
ATRX-205ENST00000479487 GOLGA8AA7E2F4 631 aa3.52□□□□□ -1.85
ATRX-205ENST00000479487 GOLGA8BA8MQT2 603 aa3.52□□□□□ -1.85
ATRX-205ENST00000479487 NARSO43776 548 aaKnown RBP3.52□□□□□ -1.85
ATRX-205ENST00000479487 PPFIA4O75335 1185 aa3.52□□□□□ -1.85
ATRX-205ENST00000479487 LPLP06858 475 aa3.52□□□□□ -1.85
ATRX-205ENST00000479487 CTSSP25774 331 aa3.52□□□□□ -1.85
ATRX-205ENST00000479487 CRHR1P34998 444 aa3.52□□□□□ -1.85
ATRX-205ENST00000479487 DDIT3P35638 169 aa3.52□□□□□ -1.85
ATRX-205ENST00000479487 WASP42768 502 aa3.52□□□□□ -1.85
ATRX-205ENST00000479487 SLC5A3P53794 718 aa3.52□□□□□ -1.85
ATRX-205ENST00000479487 NPEPPSP55786 919 aa3.52□□□□□ -1.85
ATRX-205ENST00000479487 GABPB1Q06547 395 aaPredicted RBP3.52□□□□□ -1.85
ATRX-205ENST00000479487 MGAT5Q09328 741 aa3.52□□□□□ -1.85
ATRX-205ENST00000479487 MRPL49Q13405 166 aaKnown RBP3.52□□□□□ -1.85
ATRX-205ENST00000479487 UBE3CQ15386 1083 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms