RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 SYNGAP1Q96PV0 1343 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 MYO1CO00159 1063 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 DKC1O60832 514 aaKnown RBP eCLIP11.29□□□□□ -0.6
MINDY3-206ENST00000477891 EDN1P05305 212 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 GLRA2P23416 452 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 LIG4P49917 911 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 POLGP54098 1239 aaPredicted RBP11.29□□□□□ -0.6
MINDY3-206ENST00000477891 TREML2Q5T2D2 321 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 LRIG3Q6UXM1 1119 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 C1orf131Q8NDD1 294 aaKnown RBP11.29□□□□□ -0.6
MINDY3-206ENST00000477891 PSPC1Q8WXF1 523 aaKnown RBP11.29□□□□□ -0.6
MINDY3-206ENST00000477891 CNKSR2Q8WXI2 1034 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 CPA5Q8WXQ8 436 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 MAGOHBQ96A72 148 aaKnown RBP11.29□□□□□ -0.6
MINDY3-206ENST00000477891 TXLNGYQ9BZA5 131 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 CNOT8Q9UFF9 292 aaKnown RBP11.29□□□□□ -0.6
MINDY3-206ENST00000477891 GTF3C4Q9UKN8 822 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 ATP8A1Q9Y2Q0 1164 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 PHIPQ8WWQ0 1821 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 SPOPO43791 374 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 EXTL3O43909 919 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 ATG7O95352 703 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 C4BPAP04003 597 aaKnown RBP11.29□□□□□ -0.6
MINDY3-206ENST00000477891 CFHP08603 1231 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 MYZAPP0CAP1 466 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 UNGP13051 313 aaPredicted RBP11.29□□□□□ -0.6
MINDY3-206ENST00000477891 TNNI1P19237 187 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 CTNNA2P26232 953 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 HPDP32754 393 aaPredicted RBP11.29□□□□□ -0.6
MINDY3-206ENST00000477891 PLTPP55058 493 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 CLDN10P78369 228 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 GCNT1Q02742 428 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 MKRN4PQ13434 485 aaPredicted RBP11.29□□□□□ -0.6
MINDY3-206ENST00000477891 STXBP2Q15833 593 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 CLEC16AQ2KHT3 1053 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 ZACNQ401N2 412 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 TDRD10Q5VZ19 366 aaKnown RBP11.29□□□□□ -0.6
MINDY3-206ENST00000477891 ZDHHC24Q6UX98 284 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 APOBEC3FQ8IUX4 373 aaKnown RBP11.29□□□□□ -0.6
MINDY3-206ENST00000477891 FBXO25Q8TCJ0 367 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 CEP89Q96ST8 783 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 FMO2Q99518 471 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 RAB17Q9H0T7 212 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 WNT8AQ9H1J5 351 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 R3HDMLQ9H3Y0 253 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 DHX33Q9H6R0 707 aaKnown RBP11.29□□□□□ -0.6
MINDY3-206ENST00000477891 ZNF302Q9NR11 478 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 PCDHA3Q9Y5H8 950 aa11.29□□□□□ -0.6
MINDY3-206ENST00000477891 SSC5DA1L4H1 1573 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 TTLL13PA6NNM8 815 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 DCDC2CA8MYV0 355 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 HMGB1P1B2RPK0 211 aaPredicted RBP11.28□□□□□ -0.6
MINDY3-206ENST00000477891 PHF2O75151 1096 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 PPFIA2O75334 1257 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 USP2O75604 605 aaPredicted RBP11.28□□□□□ -0.6
MINDY3-206ENST00000477891 RARAP10276 462 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 BRCA1P38398 1863 aaKnown RBP11.28□□□□□ -0.6
MINDY3-206ENST00000477891 KCNJ1P48048 391 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 IRX5P78411 483 aaPredicted RBP11.28□□□□□ -0.6
MINDY3-206ENST00000477891 SIX1Q15475 284 aaPredicted RBP11.28□□□□□ -0.6
MINDY3-206ENST00000477891 SEZ6Q53EL9 994 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 CCDC137Q6PK04 289 aaKnown RBP11.28□□□□□ -0.6
MINDY3-206ENST00000477891 USP37Q86T82 979 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 ANKRD35Q8N283 1001 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 PCYT2Q99447 389 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 TARS2Q9BW92 718 aaKnown RBP11.28□□□□□ -0.6
MINDY3-206ENST00000477891 MTFR1LQ9H019 292 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 PORCNQ9H237 461 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 EPB41L4BQ9H329 900 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 GPRC5DQ9NZD1 345 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 GRHL1Q9NZI5 618 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 BCCIPQ9P287 314 aaKnown RBP eCLIP11.28□□□□□ -0.6
MINDY3-206ENST00000477891 AGO2Q9UKV8 859 aaKnown RBP11.28□□□□□ -0.6
MINDY3-206ENST00000477891 STYXL1Q9Y6J8 313 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 MYH9P35579 1960 aaKnown RBP11.28□□□□□ -0.6
MINDY3-206ENST00000477891 LTBP3Q9NS15 1303 aa11.28□□□□□ -0.6
MINDY3-206ENST00000477891 FAM187AA6NFU0 413 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 LRRIQ4A6NIV6 560 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 K7ERI5 159 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 STAM2O75886 525 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 VNN1O95497 513 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 HLA-DRAP01903 254 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 OATP04181 439 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 SSTR3P32745 418 aaPredicted RBP11.27□□□□□ -0.6
MINDY3-206ENST00000477891 LSP1P33241 339 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 ARL2P36404 184 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 RPL21P46778 160 aaKnown RBP11.27□□□□□ -0.6
MINDY3-206ENST00000477891 DRP2Q13474 957 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 DHX34Q14147 1143 aaKnown RBP11.27□□□□□ -0.6
MINDY3-206ENST00000477891 PSMD6Q15008 389 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 PPP2R5EQ16537 467 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 UBAP2Q5T6F2 1119 aaKnown RBP11.27□□□□□ -0.6
MINDY3-206ENST00000477891 DAB2IPQ5VWQ8 1189 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 SLC13A5Q86YT5 568 aaPredicted RBP11.27□□□□□ -0.6
MINDY3-206ENST00000477891 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.27□□□□□ -0.6
MINDY3-206ENST00000477891 FNBP1Q96RU3 617 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 APOBEC3GQ9HC16 384 aaKnown RBP11.27□□□□□ -0.6
MINDY3-206ENST00000477891 C1orf112Q9NSG2 853 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 BTBD7Q9P203 1132 aa11.27□□□□□ -0.6
MINDY3-206ENST00000477891 UVRAGQ9P2Y5 699 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms