RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 GAGE12HA6NDE8 117 aa6.21□□□□□ -1.42
VPS50-213ENST00000477572 PPFIA4O75335 1185 aa6.21□□□□□ -1.42
VPS50-213ENST00000477572 CPEP16870 476 aa6.21□□□□□ -1.42
VPS50-213ENST00000477572 FPR1P21462 350 aa6.21□□□□□ -1.42
VPS50-213ENST00000477572 DDX6P26196 483 aaKnown RBP eCLIP6.21□□□□□ -1.42
VPS50-213ENST00000477572 PURAQ00577 322 aaKnown RBP6.21□□□□□ -1.42
VPS50-213ENST00000477572 RESTQ13127 1097 aa6.21□□□□□ -1.42
VPS50-213ENST00000477572 TP53BP2Q13625 1128 aa6.21□□□□□ -1.42
VPS50-213ENST00000477572 Q6YL49 198 aa6.21□□□□□ -1.42
VPS50-213ENST00000477572 PPM1NQ8N819 430 aa6.21□□□□□ -1.42
VPS50-213ENST00000477572 OR56A1Q8NGH5 318 aa6.21□□□□□ -1.42
VPS50-213ENST00000477572 CRAMP1Q96RY5 1269 aa6.21□□□□□ -1.42
VPS50-213ENST00000477572 ADAM2Q99965 735 aa6.21□□□□□ -1.42
VPS50-213ENST00000477572 MYOCQ99972 504 aa6.21□□□□□ -1.42
VPS50-213ENST00000477572 KRTAP17-1Q9BYP8 105 aa6.21□□□□□ -1.42
VPS50-213ENST00000477572 AJAP1Q9UKB5 411 aaPredicted RBP6.21□□□□□ -1.42
VPS50-213ENST00000477572 DNM3Q9UQ16 869 aa6.21□□□□□ -1.42
VPS50-213ENST00000477572 CLSTN1O94985 981 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 NUDT3O95989 172 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 SNRPA1P09661 255 aaKnown RBP6.2□□□□□ -1.42
VPS50-213ENST00000477572 SPATA31D3P0C874 917 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 SLC6A2P23975 617 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 MCAMP43121 646 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 ALDH1A3P47895 512 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 GUCY1B3Q02153 619 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 MALLQ13021 153 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 SEPT2Q15019 361 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 FAM180AQ6UWF9 173 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 SPATA31D4Q6ZUB0 917 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 KRT26Q7Z3Y9 468 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 ARHGEF19Q8IW93 802 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 DPF2Q92785 391 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 HOXB13Q92826 284 aaPredicted RBP6.2□□□□□ -1.42
VPS50-213ENST00000477572 ZSWIM1Q9BR11 485 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 RUVBL1Q9Y265 456 aaKnown RBP6.2□□□□□ -1.42
VPS50-213ENST00000477572 ACTL7AQ9Y615 435 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 FPGT-TNNI3KV9GXZ4 949 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 COL4A3Q01955 1670 aa6.2□□□□□ -1.42
VPS50-213ENST00000477572 DIRC3C9JPN6 131 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 PJA2O43164 708 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 PPFIA2O75334 1257 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 SPDEFO95238 335 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 VIL1P09327 827 aaKnown RBP6.19□□□□□ -1.42
VPS50-213ENST00000477572 ATP5JP18859 108 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 POU3F3P20264 500 aaPredicted RBP6.19□□□□□ -1.42
VPS50-213ENST00000477572 USP14P54578 494 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 RRP12Q5JTH9 1297 aaKnown RBP6.19□□□□□ -1.42
VPS50-213ENST00000477572 AGAP9Q5VTM2 703 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 UBE3BQ7Z3V4 1068 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 SPATS2Q86XZ4 545 aaKnown RBP6.19□□□□□ -1.42
VPS50-213ENST00000477572 SUPT20HQ8NEM7 779 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 OR2I1PQ8NGU4 316 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 CCHCR1Q8TD31 782 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 ASB10Q8WXI3 467 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 LANCL2Q9NS86 450 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 ZNHIT2Q9UHR6 403 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 ATP11BQ9Y2G3 1177 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 SIK3Q9Y2K2 1263 aa6.19□□□□□ -1.42
VPS50-213ENST00000477572 CCDC78A2IDD5 438 aa6.18□□□□□ -1.42
VPS50-213ENST00000477572 RHOBTB3O94955 611 aa6.18□□□□□ -1.42
VPS50-213ENST00000477572 HLA-DOAP06340 250 aa6.18□□□□□ -1.42
VPS50-213ENST00000477572 ELANEP08246 267 aa6.18□□□□□ -1.42
VPS50-213ENST00000477572 TGM1P22735 817 aa6.18□□□□□ -1.42
VPS50-213ENST00000477572 BMPR1AP36894 532 aa6.18□□□□□ -1.42
VPS50-213ENST00000477572 PLA2G5P39877 138 aa6.18□□□□□ -1.42
VPS50-213ENST00000477572 SP140Q13342 867 aa6.18□□□□□ -1.42
VPS50-213ENST00000477572 CLUL1Q15846 466 aa6.18□□□□□ -1.42
VPS50-213ENST00000477572 ZNF529Q6P280 563 aa6.18□□□□□ -1.42
VPS50-213ENST00000477572 RAB24Q969Q5 203 aa6.18□□□□□ -1.42
VPS50-213ENST00000477572 KLHL11Q9NVR0 708 aa6.18□□□□□ -1.42
VPS50-213ENST00000477572 RNF181Q9P0P0 153 aa6.18□□□□□ -1.42
VPS50-213ENST00000477572 DKK2Q9UBU2 259 aa6.18□□□□□ -1.42
VPS50-213ENST00000477572 AATKQ6ZMQ8 1374 aa6.18□□□□□ -1.42
VPS50-213ENST00000477572 PRSS23O95084 383 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 LMNAP02545 664 aaKnown RBP6.17□□□□□ -1.42
VPS50-213ENST00000477572 IL2RBP14784 551 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 PCSK1P29120 753 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 GUCY1A2P33402 732 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 SLC6A9P48067 706 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 MTNR1BP49286 362 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 SLC5A3P53794 718 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 ERVK-21P61565 698 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 FAPQ12884 760 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 OLFML1Q6UWY5 402 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 MAPKAPK5Q8IW41 473 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 RHOT2Q8IXI1 618 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 CAVIN3Q969G5 261 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 RIOX1Q9H6W3 641 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 FBXO34Q9NWN3 711 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 MOCS1Q9NZB8 636 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 SLC23A1Q9UHI7 598 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 GPR45Q9Y5Y3 372 aa6.17□□□□□ -1.42
VPS50-213ENST00000477572 MARCH11A6NNE9 402 aa6.16□□□□□ -1.42
VPS50-213ENST00000477572 KIAA0355O15063 1070 aa6.16□□□□□ -1.42
VPS50-213ENST00000477572 POMCP01189 267 aa6.16□□□□□ -1.42
VPS50-213ENST00000477572 ITGAMP11215 1152 aa6.16□□□□□ -1.42
VPS50-213ENST00000477572 UBXN2BQ14CS0 331 aa6.16□□□□□ -1.42
VPS50-213ENST00000477572 ANO4Q32M45 955 aa6.16□□□□□ -1.42
VPS50-213ENST00000477572 RNF219Q5W0B1 726 aaPredicted RBP6.16□□□□□ -1.42
VPS50-213ENST00000477572 SLC44A3Q8N4M1 653 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms