RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 CLRN1P58418 232 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 TAP1Q03518 808 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 FOXI1Q12951 378 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 FAM47AQ5JRC9 791 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 Q6ZVL8 140 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 MED25Q71SY5 747 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 ASB10Q8WXI3 467 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 TTC1Q99614 292 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 LDAHQ9H6V9 325 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 VTA1Q9NP79 307 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 FPGT-TNNI3KV9GXZ4 949 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 ARHGEF17Q96PE2 2063 aaPredicted RBP5.66□□□□□ -1.5
UBR3-209ENST00000477461 DNMBPQ6XZF7 1577 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 PNPLA7Q6ZV29 1317 aa5.66□□□□□ -1.5
UBR3-209ENST00000477461 HLA-DOAP06340 250 aa5.65□□□□□ -1.5
UBR3-209ENST00000477461 SPATA31D3P0C874 917 aa5.65□□□□□ -1.5
UBR3-209ENST00000477461 CRHR1P34998 444 aa5.65□□□□□ -1.5
UBR3-209ENST00000477461 FLT3LGP49771 235 aa5.65□□□□□ -1.5
UBR3-209ENST00000477461 PER3P56645 1201 aa5.65□□□□□ -1.5
UBR3-209ENST00000477461 SESN3P58005 492 aa5.65□□□□□ -1.5
UBR3-209ENST00000477461 DHCR24Q15392 516 aa5.65□□□□□ -1.5
UBR3-209ENST00000477461 SPATA31D4Q6ZUB0 917 aa5.65□□□□□ -1.5
UBR3-209ENST00000477461 ADGRG3Q86Y34 549 aa5.65□□□□□ -1.5
UBR3-209ENST00000477461 GPR156Q8NFN8 814 aa5.65□□□□□ -1.5
UBR3-209ENST00000477461 UHRF1Q96T88 793 aaPredicted RBP5.65□□□□□ -1.5
UBR3-209ENST00000477461 ZSWIM1Q9BR11 485 aa5.65□□□□□ -1.5
UBR3-209ENST00000477461 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.5
UBR3-209ENST00000477461 RSAD1Q9HA92 442 aa5.65□□□□□ -1.5
UBR3-209ENST00000477461 SYBUQ9NX95 663 aa5.65□□□□□ -1.5
UBR3-209ENST00000477461 ATP11BQ9Y2G3 1177 aa5.65□□□□□ -1.5
UBR3-209ENST00000477461 URB2Q14146 1524 aaKnown RBP5.64□□□□□ -1.51
UBR3-209ENST00000477461 TOPBP1Q92547 1522 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 THOC2Q8NI27 1593 aaKnown RBP5.64□□□□□ -1.51
UBR3-209ENST00000477461 TOP2BQ02880 1626 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 BIVM-ERCC5R4GMW8 1640 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 PIPSLA2A3N6 862 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 MASP2O00187 686 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 ZEB2O60315 1214 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 PHF2O75151 1096 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 HKR1P10072 659 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 RAP2AP10114 183 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 ITGAMP11215 1152 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 IL12RB1P42701 662 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 SEC24CP53992 1094 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 TAF7LQ5H9L4 462 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 RRP12Q5JTH9 1297 aaKnown RBP5.64□□□□□ -1.51
UBR3-209ENST00000477461 RNF180Q86T96 592 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 TRMT2AQ8IZ69 625 aaKnown RBP5.64□□□□□ -1.51
UBR3-209ENST00000477461 SLC44A3Q8N4M1 653 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 OR56A1Q8NGH5 318 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 TSPEARQ8WU66 669 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 RAX2Q96IS3 184 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 ACAP3Q96P50 834 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 DMRT3Q9NQL9 472 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 TNFRSF18Q9Y5U5 241 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 WDR62O43379 1518 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 CUX1P39880 1505 aa5.64□□□□□ -1.51
UBR3-209ENST00000477461 SYNJ1O43426 1573 aa5.63□□□□□ -1.51
UBR3-209ENST00000477461 ULK1O75385 1050 aa5.63□□□□□ -1.51
UBR3-209ENST00000477461 ELANEP08246 267 aa5.63□□□□□ -1.51
UBR3-209ENST00000477461 CXCR5P32302 372 aa5.63□□□□□ -1.51
UBR3-209ENST00000477461 AVPR1BP47901 424 aa5.63□□□□□ -1.51
UBR3-209ENST00000477461 MRPS21P82921 87 aaKnown RBP5.63□□□□□ -1.51
UBR3-209ENST00000477461 NOMO1Q15155 1222 aa5.63□□□□□ -1.51
UBR3-209ENST00000477461 CCDC142Q17RM4 750 aa5.63□□□□□ -1.51
UBR3-209ENST00000477461 MST1LQ2TV78 715 aa5.63□□□□□ -1.51
UBR3-209ENST00000477461 TOR2AQ5JU69 321 aa5.63□□□□□ -1.51
UBR3-209ENST00000477461 AFMIDQ63HM1 303 aa5.63□□□□□ -1.51
UBR3-209ENST00000477461 EGFLAMQ63HQ2 1017 aa5.63□□□□□ -1.51
UBR3-209ENST00000477461 THNSL2Q86YJ6 484 aa5.63□□□□□ -1.51
UBR3-209ENST00000477461 PQLC1Q8N2U9 271 aa5.63□□□□□ -1.51
UBR3-209ENST00000477461 NTN5Q8WTR8 489 aaPredicted RBP5.63□□□□□ -1.51
UBR3-209ENST00000477461 BBC3Q96PG8 261 aaPredicted RBP5.63□□□□□ -1.51
UBR3-209ENST00000477461 MRI1Q9BV20 369 aa5.63□□□□□ -1.51
UBR3-209ENST00000477461 TESQ9UGI8 421 aaKnown RBP5.63□□□□□ -1.51
UBR3-209ENST00000477461 SALL3Q9BXA9 1300 aa5.63□□□□□ -1.51
UBR3-209ENST00000477461 KAT6AQ92794 2004 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 CLSTN1O94985 981 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 ECHS1P30084 290 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 AGAP9Q5VTM2 703 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 ZNF572Q7Z3I7 529 aaPredicted RBP5.62□□□□□ -1.51
UBR3-209ENST00000477461 MAPKAPK5Q8IW41 473 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 TMEM132CQ8N3T6 1108 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 OR7D4Q8NG98 312 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 AUTS2Q8WXX7 1259 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 LINC00476Q8WZB0 136 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 FATE1Q969F0 183 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 VOPP1Q96AW1 172 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 ALOXE3Q9BYJ1 711 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 PRDM13Q9H4Q3 707 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 IFT122Q9HBG6 1241 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 KLHL11Q9NVR0 708 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 ATRNL1Q5VV63 1379 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 AATKQ6ZMQ8 1374 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 FGD5Q6ZNL6 1462 aa5.62□□□□□ -1.51
UBR3-209ENST00000477461 CCDC78A2IDD5 438 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 CDKL5O76039 1030 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 PRSS23O95084 383 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 CFIP05156 583 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 SNRPA1P09661 255 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms