RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 CHPF2Q9P2E5 772 aa4.32□□□□□ -1.72
TARDBP-208ENST00000477447 JAG2Q9Y219 1238 aa4.32□□□□□ -1.72
TARDBP-208ENST00000477447 PCDHB1Q9Y5F3 818 aa4.32□□□□□ -1.72
TARDBP-208ENST00000477447 LRRC14BA6NHZ5 514 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 CXorf49A8MYA2 514 aaPredicted RBP4.31□□□□□ -1.72
TARDBP-208ENST00000477447 CYP27B1O15528 508 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 FTLP02792 175 aaPredicted RBP4.31□□□□□ -1.72
TARDBP-208ENST00000477447 SNRPA1P09661 255 aaKnown RBP4.31□□□□□ -1.72
TARDBP-208ENST00000477447 U2AF1L5P0DN76 240 aaPredicted RBP4.31□□□□□ -1.72
TARDBP-208ENST00000477447 ATF3P18847 181 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 ATP5JP18859 108 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 LPOP22079 712 aaPredicted RBP4.31□□□□□ -1.72
TARDBP-208ENST00000477447 U2AF1Q01081 240 aaKnown RBP eCLIP4.31□□□□□ -1.723e-7■■■□□ 15.3
TARDBP-208ENST00000477447 SPTY2D1Q68D10 685 aaPredicted RBP4.31□□□□□ -1.72
TARDBP-208ENST00000477447 NXNQ6DKJ4 435 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 MAMDC4Q6UXC1 1216 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 Q6ZSN1 163 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 EPM2AIP1Q7L775 607 aaPredicted RBP4.31□□□□□ -1.72
TARDBP-208ENST00000477447 TTC7BQ86TV6 843 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 PALM2Q8IXS6 379 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 PRR18Q8N4B5 295 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 MAGEB6Q8N7X4 407 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 RNF169Q8NCN4 708 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 MDGA1Q8NFP4 955 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 IFI44Q8TCB0 444 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 NSUN6Q8TEA1 469 aaKnown RBP4.31□□□□□ -1.72
TARDBP-208ENST00000477447 TFAP2CQ92754 450 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 HPS3Q969F9 1004 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 MRI1Q9BV20 369 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 GPR87Q9BY21 358 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 SLC12A5Q9H2X9 1139 aa4.31□□□□□ -1.72
TARDBP-208ENST00000477447 HECAQ9UBI9 543 aaPredicted RBP4.31□□□□□ -1.72
TARDBP-208ENST00000477447 MUSKO15146 869 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 MARCH6O60337 910 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 HIBADHP31937 336 aaKnown RBP4.3□□□□□ -1.72
TARDBP-208ENST00000477447 CLRN1P58418 232 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 ZNF280AP59817 542 aaPredicted RBP4.3□□□□□ -1.72
TARDBP-208ENST00000477447 CTXN1P60606 82 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 ATP8B2P98198 1209 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 DSC2Q02487 901 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 CREMQ03060 361 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 TLE1Q04724 770 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 GTF2H3Q13889 308 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 RAB39AQ14964 217 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 ATP2B3Q16720 1220 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 CCDC157Q569K6 752 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 ATAT1Q5SQI0 421 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 ZNF529Q6P280 563 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 Q6ZRM9 215 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 PLXDC1Q8IUK5 500 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 GSPT2Q8IYD1 628 aaKnown RBP4.3□□□□□ -1.72
TARDBP-208ENST00000477447 CAMKK1Q8N5S9 505 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 DCBLD1Q8N8Z6 715 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 OR52N2Q8NGI0 321 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 DIS3LQ8TF46 1054 aaKnown RBP4.3□□□□□ -1.72
TARDBP-208ENST00000477447 MRGPRX4Q96LA9 322 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 TAAR9Q96RI9 348 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 MYOCQ99972 504 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 VRK1Q99986 396 aaPredicted RBP4.3□□□□□ -1.72
TARDBP-208ENST00000477447 KLC2Q9H0B6 622 aa4.3□□□□□ -1.72
TARDBP-208ENST00000477447 TBKBP1A7MCY6 615 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 KIAA0391O15091 583 aaKnown RBP4.29□□□□□ -1.72
TARDBP-208ENST00000477447 PJA2O43164 708 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 CD1AP06126 327 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 MYBP10242 640 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 MAGEA10P43363 369 aaPredicted RBP4.29□□□□□ -1.72
TARDBP-208ENST00000477447 MAN2A2P49641 1150 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 SCNN1GP51170 649 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 MAP2K6P52564 334 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 RABGGTBP53611 331 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 EFEMP1Q12805 493 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 NOGQ13253 232 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 CNGB1Q14028 1251 aaPredicted RBP4.29□□□□□ -1.72
TARDBP-208ENST00000477447 PRKD1Q15139 912 aaPredicted RBP4.29□□□□□ -1.72
TARDBP-208ENST00000477447 BMT2Q1RMZ1 405 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 MINDY4Q4G0A6 757 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 KHDC1Q4VXA5 237 aaKnown RBP4.29□□□□□ -1.72
TARDBP-208ENST00000477447 DCAF17Q5H9S7 520 aaPredicted RBP4.29□□□□□ -1.72
TARDBP-208ENST00000477447 ATXN7L2Q5T6C5 722 aaPredicted RBP4.29□□□□□ -1.72
TARDBP-208ENST00000477447 THEMIS2Q5TEJ8 643 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 C1QL3Q5VWW1 255 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 OTUD7BQ6GQQ9 843 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 EFCAB12Q6NXP0 572 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 B3GNT9Q6UX72 402 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 SEM1Q6ZVN7 128 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 GPRIN1Q7Z2K8 1008 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 C14orf80Q86SX3 495 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 ZBTB34Q8NCN2 500 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 OR10H5Q8NGA6 315 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 ZFP28Q8NHY6 868 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 EDAQ92838 391 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 DVL3Q92997 716 aaPredicted RBP4.29□□□□□ -1.72
TARDBP-208ENST00000477447 C11orf54Q9H0W9 315 aaPredicted RBP4.29□□□□□ -1.72
TARDBP-208ENST00000477447 KMT5AQ9NQR1 393 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 POGKQ9P215 609 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 SLC23A1Q9UHI7 598 aa4.29□□□□□ -1.72
TARDBP-208ENST00000477447 TCRBV7S2A1N4TA0A589 114 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 KLRG2A4D1S0 409 aaPredicted RBP4.28□□□□□ -1.72
TARDBP-208ENST00000477447 VSTM5A8MXK1 200 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 GOLGA6L6A8MZA4 724 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms