RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 AXDND1Q5T1B0 1012 aaPredicted RBP17.05■□□□□ 0.32
COMMD6-209ENST00000477377 SLC39A4Q6P5W5 647 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 MYCT1Q8N699 235 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 C12orf76Q8N812 135 aaPredicted RBP17.05■□□□□ 0.32
COMMD6-209ENST00000477377 SPRYD3Q8NCJ5 442 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 SNX27Q96L92 541 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 STRA6Q9BX79 667 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 PANK2Q9BZ23 570 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 PARVGQ9HBI0 331 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 GOLGA2P5Q9HBQ8 144 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 C11orf16Q9NQ32 467 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 MRPL17Q9NRX2 175 aaKnown RBP17.05■□□□□ 0.32
COMMD6-209ENST00000477377 STK17AQ9UEE5 414 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 TBX20Q9UMR3 447 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 ZDHHC9Q9Y397 364 aa17.05■□□□□ 0.32
COMMD6-209ENST00000477377 C2CD2LO14523 706 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 SPTLC2O15270 562 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 KCNE1P15382 129 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 NMT1P30419 496 aaKnown RBP17.04■□□□□ 0.32
COMMD6-209ENST00000477377 CA8P35219 290 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 GLUD2P49448 558 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 GTF2BQ00403 316 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 STRN3Q13033 797 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 BMS1Q14692 1282 aaKnown RBP17.04■□□□□ 0.32
COMMD6-209ENST00000477377 UPP1Q16831 310 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 RTP2Q5QGT7 225 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 RRAGBQ5VZM2 374 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 SHC4Q6S5L8 630 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 DYMQ7RTS9 669 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 GPR65Q8IYL9 337 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 TMEM130Q8N3G9 435 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 C3orf58Q8NDZ4 430 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 HASPINQ8TF76 798 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 DDX12PQ92771 950 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 ADAM7Q9H2U9 754 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 ST6GALNAC4Q9H4F1 302 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 CNTN3Q9P232 1028 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 CCDC39Q9UFE4 941 aa17.04■□□□□ 0.32
COMMD6-209ENST00000477377 TMEM189-UBE2V1I3L0A0 370 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 NR1I2O75469 434 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 TADA2AO75478 443 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 PPP1R37O75864 691 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 FAM13AO94988 1023 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 YEATS4O95619 227 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 CLCNKBP51801 687 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 STK38Q15208 465 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 E2F4Q16254 413 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 USP41Q3LFD5 358 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 ZC2HC1CQ53FD0 456 aaPredicted RBP17.03■□□□□ 0.32
COMMD6-209ENST00000477377 ZBTB41Q5SVQ8 909 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 ZNF720Q7Z2F6 126 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 RASSF8Q8NHQ8 419 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 ACAP3Q96P50 834 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 TCHPQ9BT92 498 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 CCDC94Q9BW85 323 aaPredicted RBP17.03■□□□□ 0.32
COMMD6-209ENST00000477377 PHF7Q9BWX1 381 aaPredicted RBP17.03■□□□□ 0.32
COMMD6-209ENST00000477377 EMILIN2Q9BXX0 1053 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 IKZF4Q9H2S9 585 aa17.03■□□□□ 0.32
COMMD6-209ENST00000477377 VWA8A3KMH1 1905 aa17.02■□□□□ 0.32
COMMD6-209ENST00000477377 PLXNA3P51805 1871 aa17.02■□□□□ 0.32
COMMD6-209ENST00000477377 FRMD3A2A2Y4 597 aa17.02■□□□□ 0.32
COMMD6-209ENST00000477377 PAPLNO95428 1278 aa17.02■□□□□ 0.32
COMMD6-209ENST00000477377 URODP06132 367 aa17.02■□□□□ 0.32
COMMD6-209ENST00000477377 ADRB2P07550 413 aa17.02■□□□□ 0.32
COMMD6-209ENST00000477377 WEE2P0C1S8 567 aa17.02■□□□□ 0.32
COMMD6-209ENST00000477377 SRGAP2BP0DMP2 458 aa17.02■□□□□ 0.32
COMMD6-209ENST00000477377 PDIA4P13667 645 aaKnown RBP17.02■□□□□ 0.32
COMMD6-209ENST00000477377 KLRC2P26717 231 aa17.02■□□□□ 0.32
COMMD6-209ENST00000477377 SSTR3P32745 418 aaPredicted RBP17.02■□□□□ 0.32
COMMD6-209ENST00000477377 TNFSF9P41273 254 aa17.02■□□□□ 0.32
COMMD6-209ENST00000477377 NOLC1Q14978 699 aaKnown RBP eCLIP17.02■□□□□ 0.32
COMMD6-209ENST00000477377 LILRA6Q6PI73 481 aa17.02■□□□□ 0.32
COMMD6-209ENST00000477377 PPFIBP1Q86W92 1011 aa17.02■□□□□ 0.32
COMMD6-209ENST00000477377 LNX1Q8TBB1 728 aaPredicted RBP17.02■□□□□ 0.32
COMMD6-209ENST00000477377 ZNF396Q96N95 335 aaPredicted RBP17.02■□□□□ 0.32
COMMD6-209ENST00000477377 ANKFY1Q9P2R3 1169 aa17.02■□□□□ 0.32
COMMD6-209ENST00000477377 SSX2IPQ9Y2D8 614 aa17.02■□□□□ 0.32
COMMD6-209ENST00000477377 TISP43B9A030 160 aa17.01■□□□□ 0.31
COMMD6-209ENST00000477377 ANKRD63C9JTQ0 380 aa17.01■□□□□ 0.31
COMMD6-209ENST00000477377 H0YCG3 227 aa17.01■□□□□ 0.31
COMMD6-209ENST00000477377 K7ENM7 598 aa17.01■□□□□ 0.31
COMMD6-209ENST00000477377 CLDN3O15551 220 aa17.01■□□□□ 0.31
COMMD6-209ENST00000477377 HARSP12081 509 aaKnown RBP17.01■□□□□ 0.31
COMMD6-209ENST00000477377 RPL17P18621 184 aaKnown RBP17.01■□□□□ 0.31
COMMD6-209ENST00000477377 ITIH3Q06033 890 aa17.01■□□□□ 0.31
COMMD6-209ENST00000477377 ZBTB6Q15916 424 aa17.01■□□□□ 0.31
COMMD6-209ENST00000477377 FOXD4L6Q3SYB3 417 aaPredicted RBP17.01■□□□□ 0.31
COMMD6-209ENST00000477377 DCLRE1AQ6PJP8 1040 aa17.01■□□□□ 0.31
COMMD6-209ENST00000477377 PRSS55Q6UWB4 352 aaPredicted RBP17.01■□□□□ 0.31
COMMD6-209ENST00000477377 FOXD4L3Q6VB84 417 aaPredicted RBP17.01■□□□□ 0.31
COMMD6-209ENST00000477377 CCDC73Q6ZRK6 1079 aa17.01■□□□□ 0.31
COMMD6-209ENST00000477377 SV2BQ7L1I2 683 aa17.01■□□□□ 0.31
COMMD6-209ENST00000477377 APBB1IPQ7Z5R6 666 aaPredicted RBP17.01■□□□□ 0.31
COMMD6-209ENST00000477377 SFR1Q86XK3 245 aa17.01■□□□□ 0.31
COMMD6-209ENST00000477377 RNF135Q8IUD6 432 aa17.01■□□□□ 0.31
COMMD6-209ENST00000477377 MAP4K3Q8IVH8 894 aa17.01■□□□□ 0.31
COMMD6-209ENST00000477377 C18orf25Q96B23 403 aaPredicted RBP17.01■□□□□ 0.31
COMMD6-209ENST00000477377 CHAMP1Q96JM3 812 aa17.01■□□□□ 0.31
COMMD6-209ENST00000477377 FBXL18Q96ME1 805 aa17.01■□□□□ 0.31
COMMD6-209ENST00000477377 CLSTN3Q9BQT9 956 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms