RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 THAP12O43422 761 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 OR6B1O95007 311 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 ITIH2P19823 946 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 GALK1P51570 392 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 MTTPP55157 894 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 KRT72Q14CN4 511 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 LRRC41Q15345 812 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 TRMT5Q32P41 509 aaKnown RBP14.7□□□□□ -0.06
HDAC1-206ENST00000476391 CC2D2BQ6DHV5 1058 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 OTOAQ7RTW8 1153 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 NET1Q7Z628 596 aaPredicted RBP14.7□□□□□ -0.06
HDAC1-206ENST00000476391 ADGRG6Q86SQ4 1221 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 PASD1Q8IV76 773 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 PRICKLE1Q96MT3 831 aaPredicted RBP14.7□□□□□ -0.06
HDAC1-206ENST00000476391 LBHD1Q9BQE6 289 aaPredicted RBP14.7□□□□□ -0.06
HDAC1-206ENST00000476391 EBF3Q9H4W6 596 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 ARHGEF38Q9NXL2 777 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 MTUS1Q9ULD2 1270 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 SMG5Q9UPR3 1016 aaKnown RBP14.7□□□□□ -0.06
HDAC1-206ENST00000476391 ZMYM2Q9UBW7 1377 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 FRMPD4Q14CM0 1322 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 ZNF862O60290 1169 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 DNAJC6O75061 913 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 ACTN1P12814 892 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 LMNB1P20700 586 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 XIAPP98170 497 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 GRB10Q13322 594 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 C6orf163Q5TEZ5 329 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 GRAMD4Q6IC98 578 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 PDSS2Q86YH6 399 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 ZC3H3Q8IXZ2 948 aaKnown RBP14.7□□□□□ -0.06
HDAC1-206ENST00000476391 OR6Y1Q8NGX8 325 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 SLC30A5Q8TAD4 765 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 KCNN1Q92952 543 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 SLCO2A1Q92959 643 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 CDK5RAP3Q96JB5 506 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 TTC25Q96NG3 672 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 USP29Q9HBJ7 922 aa14.7□□□□□ -0.06
HDAC1-206ENST00000476391 CFAP69A5D8W1 941 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 TP73O15350 636 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 PDE8BO95263 885 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 CETPP11597 493 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 SLC9A1P19634 815 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 AMPD1P23109 780 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 TECP42680 631 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 RPL5P46777 297 aaKnown RBP14.69□□□□□ -0.06
HDAC1-206ENST00000476391 VPS41P49754 854 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 JAM2P57087 298 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 ADCY1Q08828 1119 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 CTTNQ14247 550 aaKnown RBP14.69□□□□□ -0.06
HDAC1-206ENST00000476391 TNIP1Q15025 636 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 C3orf62Q6ZUJ4 267 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 ATP11CQ8NB49 1132 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 MAML1Q92585 1016 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 ANKRD2Q9GZV1 360 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 UBA5Q9GZZ9 404 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 GPAMQ9HCL2 828 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 TRPV5Q9NQA5 729 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 TYW1Q9NV66 732 aaKnown RBP14.69□□□□□ -0.06
HDAC1-206ENST00000476391 TUBA8Q9NY65 449 aaPredicted RBP14.69□□□□□ -0.06
HDAC1-206ENST00000476391 TMOD4Q9NZQ9 345 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 AMOTL2Q9Y2J4 779 aa14.69□□□□□ -0.06
HDAC1-206ENST00000476391 R3HDM2Q9Y2K5 976 aaKnown RBP14.69□□□□□ -0.06
HDAC1-206ENST00000476391 RARBP10826 455 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 UQCRBP14927 111 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 PGM1P36871 562 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 PDE1BQ01064 536 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 CAV1Q03135 178 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 SPIDRQ14159 915 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 MAP3K21Q5TCX8 1036 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 SEL1L2Q5TEA6 688 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 CCDC62Q6P9F0 684 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 TRABD2AQ86V40 505 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 CROCCP3Q8IVE0 287 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 ZDHHC14Q8IZN3 488 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 C12orf50Q8NA57 414 aaPredicted RBP14.68□□□□□ -0.06
HDAC1-206ENST00000476391 GLIS3Q8NEA6 775 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 DDX12PQ92771 950 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 KANSL2Q9H9L4 492 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 SENP1Q9P0U3 644 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 ANKFY1Q9P2R3 1169 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.68□□□□□ -0.06
HDAC1-206ENST00000476391 NUMBLQ9Y6R0 609 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 C10orf71Q711Q0 1435 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 UBR1Q8IWV7 1749 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 KANSL1LA0AUZ9 987 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 HTR3EA5X5Y0 456 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 FGRP09769 529 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 PON1P27169 355 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 CETN2P41208 172 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 HADHBP55084 474 aaKnown RBP14.68□□□□□ -0.06
HDAC1-206ENST00000476391 RASGRF1Q13972 1273 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 TRIM67Q6ZTA4 783 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 RASSF3Q86WH2 238 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 DQX1Q8TE96 717 aaKnown RBP14.68□□□□□ -0.06
HDAC1-206ENST00000476391 OSBPL8Q9BZF1 889 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 NPHS2Q9NP85 383 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 NLRP2Q9NX02 1062 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 PTPN22Q9Y2R2 807 aa14.68□□□□□ -0.06
HDAC1-206ENST00000476391 KAT6BQ8WYB5 2073 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms