RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 C12orf42Q96LP6 360 aa7.41□□□□□ -1.22
UBR4-212ENST00000475973 RPS6KC1Q96S38 1066 aa7.41□□□□□ -1.22
UBR4-212ENST00000475973 PSMB7Q99436 277 aa7.41□□□□□ -1.22
UBR4-212ENST00000475973 REEP2Q9BRK0 252 aa7.41□□□□□ -1.22
UBR4-212ENST00000475973 ERP44Q9BS26 406 aa7.41□□□□□ -1.22
UBR4-212ENST00000475973 CNOT10Q9H9A5 744 aaKnown RBP7.41□□□□□ -1.22
UBR4-212ENST00000475973 VAT1LQ9HCJ6 419 aa7.41□□□□□ -1.22
UBR4-212ENST00000475973 TUFT1Q9NNX1 390 aa7.41□□□□□ -1.22
UBR4-212ENST00000475973 GRHL1Q9NZI5 618 aa7.41□□□□□ -1.22
UBR4-212ENST00000475973 MORF4L1Q9UBU8 362 aa7.41□□□□□ -1.22
UBR4-212ENST00000475973 DDX20Q9UHI6 824 aaKnown RBP7.41□□□□□ -1.22
UBR4-212ENST00000475973 PFASO15067 1338 aa7.41□□□□□ -1.22
UBR4-212ENST00000475973 FRMPD2Q68DX3 1309 aaPredicted RBP7.41□□□□□ -1.22
UBR4-212ENST00000475973 ANKRD62A6NC57 917 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 MIF4GDA9UHW6 222 aaKnown RBP7.4□□□□□ -1.22
UBR4-212ENST00000475973 FAM86B1E9PN63 330 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 GCOM1H8Y6P7 765 aaPredicted RBP7.4□□□□□ -1.22
UBR4-212ENST00000475973 DNM1LO00429 736 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 CHUKO15111 745 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 TP73O15350 636 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 ASAP2O43150 1006 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 MGRN1O60291 552 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 PLA2G6O60733 806 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 TCEA3O75764 348 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 GGPS1O95749 300 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 OAS1P00973 400 aaKnown RBP7.4□□□□□ -1.22
UBR4-212ENST00000475973 FAM86B2P0C5J1 330 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 MYZAPP0CAP1 466 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 XRCC5P13010 732 aaKnown RBP7.4□□□□□ -1.22
UBR4-212ENST00000475973 ITGA4P13612 1032 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 ELNP15502 786 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 JUNDP17535 347 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 RPL13P26373 211 aaKnown RBP7.4□□□□□ -1.22
UBR4-212ENST00000475973 GBP1P32455 592 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 STAT1P42224 750 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 MATR3P43243 847 aaKnown RBP eCLIP7.4□□□□□ -1.22
UBR4-212ENST00000475973 CASP4P49662 377 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 SEC24CP53992 1094 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 PDE4CQ08493 712 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 NR1H3Q13133 447 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 PPP2R5CQ13362 524 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 RIPK1Q13546 671 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 SIX1Q15475 284 aaPredicted RBP7.4□□□□□ -1.22
UBR4-212ENST00000475973 ZYXQ15942 572 aaKnown RBP7.4□□□□□ -1.22
UBR4-212ENST00000475973 PTPRNQ16849 979 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 PREPLQ4J6C6 727 aaPredicted RBP7.4□□□□□ -1.22
UBR4-212ENST00000475973 CEP85LQ5SZL2 805 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 MFSD5Q6N075 450 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 RINT1Q6NUQ1 792 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 ZNF720Q7Z2F6 126 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 FAM228AQ86W67 206 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 SFR1Q86XK3 245 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 CCDC26Q8TAB7 109 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 U2AF1L4Q8WU68 220 aaKnown RBP7.4□□□□□ -1.22
UBR4-212ENST00000475973 ATXN2LQ8WWM7 1075 aaKnown RBP7.4□□□□□ -1.22
UBR4-212ENST00000475973 RAPGEF5Q92565 580 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 TAF4BQ92750 862 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 SLC5A5Q92911 643 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 UCN2Q96RP3 112 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 RUFY1Q96T51 708 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 HINFPQ9BQA5 517 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 KIAA1683Q9H0B3 1180 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 UNC93B1Q9H1C4 597 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 PABPC3Q9H361 631 aaKnown RBP7.4□□□□□ -1.22
UBR4-212ENST00000475973 ST6GALNAC4Q9H4F1 302 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 FKBPLQ9UIM3 349 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 PACSIN2Q9UNF0 486 aaPredicted RBP7.4□□□□□ -1.22
UBR4-212ENST00000475973 DNM3Q9UQ16 869 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 NR2E1Q9Y466 385 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 SAMM50Q9Y512 469 aa7.4□□□□□ -1.22
UBR4-212ENST00000475973 RPTORQ8N122 1335 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 IGSF9BQ9UPX0 1349 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 USP17L15C9J2P7 530 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 USP17L13C9JLJ4 530 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 USP17L11C9JVI0 530 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 USP17L18D6R9N7 530 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 USP17L22D6RA61 530 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 USP17L17D6RBQ6 530 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 USP17L19D6RCP7 530 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 USP17L20D6RJB6 530 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 MPHOSPH10O00566 681 aaKnown RBP7.39□□□□□ -1.23
UBR4-212ENST00000475973 MSH4O15457 936 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 DAPK3O43293 454 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 CEP104O60308 925 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 BUB1BO60566 1050 aaPredicted RBP7.39□□□□□ -1.23
UBR4-212ENST00000475973 SLITRK3O94933 977 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 GZMAP12544 262 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 PSMC2P35998 433 aaKnown RBP7.39□□□□□ -1.23
UBR4-212ENST00000475973 FMO5P49326 533 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 ATP1A2P50993 1020 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 GUCY2FP51841 1108 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 GTF2A1P52655 376 aaPredicted RBP7.39□□□□□ -1.23
UBR4-212ENST00000475973 SNRPFP62306 86 aaKnown RBP7.39□□□□□ -1.23
UBR4-212ENST00000475973 USP17L24Q0WX57 530 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 MAPK7Q13164 816 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 ITIH4Q14624 930 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 CCDC142Q17RM4 750 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 SPRED3Q2MJR0 410 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 GALNTL6Q49A17 601 aa7.39□□□□□ -1.23
UBR4-212ENST00000475973 ANKRD20A8PQ5CZ79 823 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms