RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 CHMP2AO43633 222 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 AKAP3O75969 853 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 ERLIN2O94905 339 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 NCBP1Q09161 790 aaKnown RBP16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 GRM2Q14416 872 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 SLC5A9Q2M3M2 681 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 DGKKQ5KSL6 1271 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 LRCH2Q5VUJ6 765 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 HEATR6Q6AI08 1181 aaKnown RBP16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 SYNE3Q6ZMZ3 975 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 GAB3Q8WWW8 586 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 SLC7A3Q8WY07 619 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 SLC5A5Q92911 643 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 KIF12Q96FN5 646 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 CSRNP2Q9H175 543 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 UNC45AQ9H3U1 944 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 V9GY48 417 aaPredicted RBP16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 LOC400499M0QZD8 3231 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 COL4A2P08572 1712 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 LAMA5O15230 3695 aa16.16■□□□□ 0.18
CSNK2B-207ENST00000475875 SDK1Q7Z5N4 2213 aa16.15■□□□□ 0.18
CSNK2B-207ENST00000475875 ASAP2O43150 1006 aa16.15■□□□□ 0.18
CSNK2B-207ENST00000475875 CEBPBP17676 345 aa16.15■□□□□ 0.18
CSNK2B-207ENST00000475875 SPIRE1Q08AE8 756 aa16.15■□□□□ 0.18
CSNK2B-207ENST00000475875 FAM171A1Q5VUB5 890 aa16.15■□□□□ 0.18
CSNK2B-207ENST00000475875 DAB2IPQ5VWQ8 1189 aa16.15■□□□□ 0.18
CSNK2B-207ENST00000475875 MIER3Q7Z3K6 550 aa16.15■□□□□ 0.18
CSNK2B-207ENST00000475875 RAB11FIP4Q86YS3 637 aa16.15■□□□□ 0.18
CSNK2B-207ENST00000475875 REXO1Q8N1G1 1221 aaKnown RBP16.15■□□□□ 0.18
CSNK2B-207ENST00000475875 ASB16Q96NS5 453 aa16.15■□□□□ 0.18
CSNK2B-207ENST00000475875 EIF2AQ9BY44 585 aaKnown RBP16.15■□□□□ 0.18
CSNK2B-207ENST00000475875 ZMYND12Q9H0C1 365 aa16.15■□□□□ 0.18
CSNK2B-207ENST00000475875 C8orf33Q9H7E9 229 aaPredicted RBP16.15■□□□□ 0.18
CSNK2B-207ENST00000475875 AKAP13Q12802 2813 aa16.15■□□□□ 0.18
CSNK2B-207ENST00000475875 TDRD15B5MCY1 1934 aaKnown RBP16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 HELZ2Q9BYK8 2649 aaKnown RBP16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 TMEM150BA6NC51 233 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 DDX11L8A8MPP1 907 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 ZNF197O14709 1029 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 ADAM12O43184 909 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 RPP40O75818 363 aaKnown RBP16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 SRGAP2CP0DJJ0 459 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 CEACAM1P13688 526 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 PTPN2P17706 415 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 CCNE1P24864 410 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 GDI1P31150 447 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 MPLP40238 635 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 NUCB1Q02818 461 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 CCDC6Q16204 474 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 FAM78AQ5JUQ0 283 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 PRSS36Q5K4E3 855 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 POTEHQ6S545 545 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 ANO5Q75V66 913 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 SYNPOQ8N3V7 929 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 CCDC12Q8WUD4 166 aaPredicted RBP16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 PRPF31Q8WWY3 499 aaKnown RBP16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 ZC3H10Q96K80 434 aaKnown RBP16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 SH2D3AQ9BRG2 576 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 SCNM1Q9BWG6 230 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 APOL6Q9BWW8 343 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 TRIM6Q9C030 488 aaPredicted RBP16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 C6orf50Q9HD87 102 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 HES2Q9Y543 173 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 SPAG17Q6Q759 2223 aa16.14■□□□□ 0.17
CSNK2B-207ENST00000475875 ARHGEF37A1IGU5 675 aa16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 ZNF263O14978 683 aa16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 TSPAN1O60635 241 aa16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 CSRP1P21291 193 aaKnown RBP16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 LAMTOR4Q0VGL1 99 aa16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 TUSC3Q13454 348 aa16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 B3GNT9Q6UX72 402 aa16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 CEP57Q86XR8 500 aa16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 SMARCD2Q92925 531 aa16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 EDEM2Q9BV94 578 aa16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 DHX33Q9H6R0 707 aaKnown RBP16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 TRPV4Q9HBA0 871 aa16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 MTRRQ9UBK8 725 aa16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 NEUROG3Q9Y4Z2 214 aa16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 FREM2Q5SZK8 3169 aa16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 MAST4O15021 2626 aa16.13■□□□□ 0.17
CSNK2B-207ENST00000475875 ARNTLO00327 626 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 GIPC1O14908 333 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 PSMD10O75832 226 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 SPINK2P20155 84 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 GNA11P29992 359 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 OR1D2P34982 312 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 RFC5P40937 340 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 RBM25P49756 843 aaKnown RBP16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 USP11P51784 963 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 PSMC5P62195 406 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 RTN1Q16799 776 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 B4GALNT3Q6L9W6 998 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 APOA5Q6Q788 366 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 VITQ6UXI7 678 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 RNF149Q8NC42 400 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 TCP11Q8WWU5 503 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 E2F7Q96AV8 911 aa16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 NXF3Q9H4D5 531 aaKnown RBP16.12■□□□□ 0.17
CSNK2B-207ENST00000475875 WDR27A2RRH5 827 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms