RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 PMM2O15305 246 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 EXOC3O60645 756 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 N4BP1O75113 896 aaKnown RBP7.65□□□□□ -1.18
SHQ1-207ENST00000475558 CAND2O75155 1236 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 PIGRP01833 764 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 CXCL10P02778 98 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 KCNA5P22460 613 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 GLRA2P23416 452 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 NR2F2P24468 414 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 NMT1P30419 496 aaKnown RBP7.65□□□□□ -1.18
SHQ1-207ENST00000475558 AXLP30530 894 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 SSTR3P32745 418 aaPredicted RBP7.65□□□□□ -1.18
SHQ1-207ENST00000475558 CHMP4BP1P59074 171 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 PTENP60484 403 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 RBL2Q08999 1139 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 LAMTOR4Q0VGL1 99 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 GPNMBQ14956 572 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 GRIK4Q16099 956 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 FAM187BQ17R55 369 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 KIAA0753Q2KHM9 967 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 CCDC40Q4G0X9 1142 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 VWA3BQ502W6 1294 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 PLA2G4FQ68DD2 849 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 SPECC1LQ69YQ0 1117 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 PTCRAQ6ISU1 281 aaPredicted RBP7.65□□□□□ -1.18
SHQ1-207ENST00000475558 ITIH6Q6UXX5 1313 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 MAEAQ7L5Y9 396 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 SPRED2Q7Z698 418 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 RPAINQ86UA6 219 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 PPFIBP1Q86W92 1011 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 CREBRFQ8IUR6 639 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 METTL13Q8N6R0 699 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.65□□□□□ -1.18
SHQ1-207ENST00000475558 PPP1R13LQ8WUF5 828 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 CCDC51Q96ER9 411 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 DUSP9Q99956 384 aaKnown RBP7.65□□□□□ -1.18
SHQ1-207ENST00000475558 MRPL4Q9BYD3 311 aaKnown RBP7.65□□□□□ -1.18
SHQ1-207ENST00000475558 GCOM2Q9BZD3 368 aaPredicted RBP7.65□□□□□ -1.18
SHQ1-207ENST00000475558 XPNPEP1Q9NQW7 623 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 IFNKQ9P0W0 207 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 INSL6Q9Y581 213 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.65□□□□□ -1.18
SHQ1-207ENST00000475558 STYXL1Q9Y6J8 313 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 SQORQ9Y6N5 450 aa7.65□□□□□ -1.18
SHQ1-207ENST00000475558 PTPRSQ13332 1948 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 GTPBP10A4D1E9 387 aaKnown RBP7.64□□□□□ -1.19
SHQ1-207ENST00000475558 MBLAC1A4D2B0 266 aaPredicted RBP7.64□□□□□ -1.19
SHQ1-207ENST00000475558 GRXCR2A6NFK2 248 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 LRRIQ4A6NIV6 560 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 ZNF233A6NK53 670 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 RSPH10B2B2RC85 870 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 M0QZ92 97 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 SLC16A4O15374 487 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 TGFB1I1O43294 461 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 TOM1L1O75674 476 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 NR3C1P04150 777 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 RSPH10BP0C881 870 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 MYBP10242 640 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 CKBP12277 381 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 MARK3P27448 753 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 GTF2H1P32780 548 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 LIG4P49917 911 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 COPB1P53618 953 aaKnown RBP7.64□□□□□ -1.19
SHQ1-207ENST00000475558 DEFB103AP81534 67 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 UBXN1Q04323 297 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 KRT31Q15323 416 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 PTPROQ16827 1216 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 FIGNQ5HY92 759 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 CDCA2Q69YH5 1023 aaPredicted RBP7.64□□□□□ -1.19
SHQ1-207ENST00000475558 GDF6Q6KF10 455 aaPredicted RBP7.64□□□□□ -1.19
SHQ1-207ENST00000475558 ARMCX5Q6P1M9 558 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 TRMT1LQ7Z2T5 733 aaKnown RBP7.64□□□□□ -1.19
SHQ1-207ENST00000475558 NELFCDQ8IXH7 590 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 CCDC112Q8NEF3 446 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 TMEM143Q96AN5 459 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 BICD1Q96G01 975 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 CNOT6LQ96LI5 555 aaKnown RBP7.64□□□□□ -1.19
SHQ1-207ENST00000475558 SAMD11Q96NU1 681 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 MED15Q96RN5 788 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 XPO4Q9C0E2 1151 aaKnown RBP7.64□□□□□ -1.19
SHQ1-207ENST00000475558 NDST4Q9H3R1 872 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 FZD8Q9H461 694 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 AGPAT3Q9NRZ7 376 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 MTUS1Q9ULD2 1270 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 FAM50BQ9Y247 325 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 MYH15Q9Y2K3 1946 aa7.64□□□□□ -1.19
SHQ1-207ENST00000475558 COL4A4P53420 1690 aaPredicted RBP7.63□□□□□ -1.19
SHQ1-207ENST00000475558 MYH7BA7E2Y1 1941 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 LGALS16A8MUM7 142 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 ZBTB42B2RXF5 422 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 HNRNPDLO14979 420 aaKnown RBP7.63□□□□□ -1.19
SHQ1-207ENST00000475558 CLDN3O15551 220 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 DCXO43602 365 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 EXTL3O43909 919 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 SORBS3O60504 671 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 NBNO60934 754 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 C22orf31O95567 290 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 CCDC172P0C7W6 258 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 SRGAP2CP0DJJ0 459 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 SMIM10L2AP0DMW4 78 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms