RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 GRXCR1A8MXD5 290 aa8.49□□□□□ -1.05
SMC5-203ENST00000475540 ZNF202O95125 648 aa8.49□□□□□ -1.05
SMC5-203ENST00000475540 ATP5JP18859 108 aa8.49□□□□□ -1.05
SMC5-203ENST00000475540 EXOSC10Q01780 885 aaKnown RBP8.49□□□□□ -1.05
SMC5-203ENST00000475540 KIF23Q02241 960 aaPredicted RBP8.49□□□□□ -1.05
SMC5-203ENST00000475540 NHLH2Q02577 135 aa8.49□□□□□ -1.05
SMC5-203ENST00000475540 CSRP2Q16527 193 aa8.49□□□□□ -1.05
SMC5-203ENST00000475540 ZNF276Q8N554 614 aa8.49□□□□□ -1.05
SMC5-203ENST00000475540 SLC25A43Q8WUT9 341 aaPredicted RBP8.49□□□□□ -1.05
SMC5-203ENST00000475540 KRTAP17-1Q9BYP8 105 aa8.49□□□□□ -1.05
SMC5-203ENST00000475540 SLC2A4RGQ9NR83 387 aa8.49□□□□□ -1.05
SMC5-203ENST00000475540 DIRC3C9JPN6 131 aa8.48□□□□□ -1.05
SMC5-203ENST00000475540 LEFTY2O00292 366 aa8.48□□□□□ -1.05
SMC5-203ENST00000475540 NARSO43776 548 aaKnown RBP8.48□□□□□ -1.05
SMC5-203ENST00000475540 GPR32O75388 356 aa8.48□□□□□ -1.05
SMC5-203ENST00000475540 SNUPNO95149 360 aaKnown RBP8.48□□□□□ -1.05
SMC5-203ENST00000475540 MCM7P33993 719 aa8.48□□□□□ -1.05
SMC5-203ENST00000475540 PTGS2P35354 604 aa8.48□□□□□ -1.05
SMC5-203ENST00000475540 RAP2BP61225 183 aa8.48□□□□□ -1.05
SMC5-203ENST00000475540 OTUD7BQ6GQQ9 843 aa8.48□□□□□ -1.05
SMC5-203ENST00000475540 RPUSD2Q8IZ73 545 aaKnown RBP8.48□□□□□ -1.05
SMC5-203ENST00000475540 ZNF483Q8TF39 744 aaPredicted RBP8.48□□□□□ -1.05
SMC5-203ENST00000475540 TRPM5Q9NZQ8 1165 aa8.48□□□□□ -1.05
SMC5-203ENST00000475540 ACTL7AQ9Y615 435 aa8.48□□□□□ -1.05
SMC5-203ENST00000475540 MYBBP1AQ9BQG0 1328 aaKnown RBP8.48□□□□□ -1.05
SMC5-203ENST00000475540 WNT10BO00744 389 aa8.47□□□□□ -1.05
SMC5-203ENST00000475540 RPS6KA4O75676 772 aa8.47□□□□□ -1.05
SMC5-203ENST00000475540 POMCP01189 267 aa8.47□□□□□ -1.05
SMC5-203ENST00000475540 DDCP20711 480 aa8.47□□□□□ -1.05
SMC5-203ENST00000475540 MAKP20794 623 aa8.47□□□□□ -1.05
SMC5-203ENST00000475540 ALDH1A3P47895 512 aa8.47□□□□□ -1.05
SMC5-203ENST00000475540 ABHD18Q0P651 414 aa8.47□□□□□ -1.05
SMC5-203ENST00000475540 ODF1Q14990 250 aa8.47□□□□□ -1.05
SMC5-203ENST00000475540 GDF7Q7Z4P5 450 aa8.47□□□□□ -1.05
SMC5-203ENST00000475540 SYT12Q8IV01 421 aa8.47□□□□□ -1.05
SMC5-203ENST00000475540 HAS1Q92839 578 aa8.47□□□□□ -1.05
SMC5-203ENST00000475540 COA7Q96BR5 231 aa8.47□□□□□ -1.05
SMC5-203ENST00000475540 PHACTR3Q96KR7 559 aa8.47□□□□□ -1.05
SMC5-203ENST00000475540 PCDHA13Q9Y5I0 950 aa8.47□□□□□ -1.05
SMC5-203ENST00000475540 PNPLA7Q6ZV29 1317 aa8.47□□□□□ -1.05
SMC5-203ENST00000475540 DRGXA6NNA5 263 aa8.46□□□□□ -1.06
SMC5-203ENST00000475540 AMY1AP04745 511 aa8.46□□□□□ -1.06
SMC5-203ENST00000475540 FPR1P21462 350 aa8.46□□□□□ -1.06
SMC5-203ENST00000475540 ACVRL1P37023 503 aa8.46□□□□□ -1.06
SMC5-203ENST00000475540 RECQLP46063 649 aaPredicted RBP8.46□□□□□ -1.06
SMC5-203ENST00000475540 RNASE9P60153 205 aaKnown RBP8.46□□□□□ -1.06
SMC5-203ENST00000475540 FNDC7Q5VTL7 733 aa8.46□□□□□ -1.06
SMC5-203ENST00000475540 PPP4R3AQ6IN85 833 aa8.46□□□□□ -1.06
SMC5-203ENST00000475540 RSPH3Q86UC2 560 aa8.46□□□□□ -1.06
SMC5-203ENST00000475540 DRC7Q8IY82 874 aa8.46□□□□□ -1.06
SMC5-203ENST00000475540 SYNE4Q8N205 404 aa8.46□□□□□ -1.06
SMC5-203ENST00000475540 SLC16A11Q8NCK7 471 aa8.46□□□□□ -1.06
SMC5-203ENST00000475540 NRDE2Q9H7Z3 1164 aa8.46□□□□□ -1.06
SMC5-203ENST00000475540 MMRN2Q9H8L6 949 aa8.46□□□□□ -1.06
SMC5-203ENST00000475540 TDP1Q9NUW8 608 aa8.46□□□□□ -1.06
SMC5-203ENST00000475540 AHRRA9YTQ3 701 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 HTRA2O43464 458 aaPredicted RBP8.45□□□□□ -1.06
SMC5-203ENST00000475540 PPFIA4O75335 1185 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 SPATA31D3P0C874 917 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 PCSK1P29120 753 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 PTTG1IPP53801 180 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 ADKP55263 362 aaKnown RBP8.45□□□□□ -1.06
SMC5-203ENST00000475540 MTM1Q13496 603 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 UBXN2BQ14CS0 331 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 ATP2B3Q16720 1220 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 IGFL4Q6B9Z1 124 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 SPATA31D4Q6ZUB0 917 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 MED25Q71SY5 747 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 MIER2Q8N344 545 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 SLC46A2Q9BY10 475 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 TYW1Q9NV66 732 aaKnown RBP8.45□□□□□ -1.06
SMC5-203ENST00000475540 SRRDQ9UH36 339 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 LIMCH1Q9UPQ0 1083 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 IPPQ9Y573 584 aa8.45□□□□□ -1.06
SMC5-203ENST00000475540 CCDC154A6NI56 674 aa8.44□□□□□ -1.06
SMC5-203ENST00000475540 CYR61O00622 381 aa8.44□□□□□ -1.06
SMC5-203ENST00000475540 RPLP2P05387 115 aaKnown RBP8.44□□□□□ -1.06
SMC5-203ENST00000475540 CHN2P52757 468 aa8.44□□□□□ -1.06
SMC5-203ENST00000475540 CREMQ03060 361 aa8.44□□□□□ -1.06
SMC5-203ENST00000475540 UAP1L1Q3KQV9 507 aa8.44□□□□□ -1.06
SMC5-203ENST00000475540 ZNF529Q6P280 563 aa8.44□□□□□ -1.06
SMC5-203ENST00000475540 SEM1Q6ZVN7 128 aa8.44□□□□□ -1.06
SMC5-203ENST00000475540 ZBTB46Q86UZ6 589 aa8.44□□□□□ -1.06
SMC5-203ENST00000475540 ZGPATQ8N5A5 531 aaKnown RBP8.44□□□□□ -1.06
SMC5-203ENST00000475540 CHMP4CQ96CF2 233 aa8.44□□□□□ -1.06
SMC5-203ENST00000475540 CLIP3Q96DZ5 547 aa8.44□□□□□ -1.06
SMC5-203ENST00000475540 CEP89Q96ST8 783 aa8.44□□□□□ -1.06
SMC5-203ENST00000475540 REXO4Q9GZR2 422 aaKnown RBP8.44□□□□□ -1.06
SMC5-203ENST00000475540 GPRC5BQ9NZH0 403 aa8.44□□□□□ -1.06
SMC5-203ENST00000475540 FAM30AQ9NZY2 134 aa8.44□□□□□ -1.06
SMC5-203ENST00000475540 RUVBL1Q9Y265 456 aaKnown RBP8.44□□□□□ -1.06
SMC5-203ENST00000475540 RNASET2O00584 256 aaKnown RBP8.43□□□□□ -1.06
SMC5-203ENST00000475540 ADH4P08319 380 aa8.43□□□□□ -1.06
SMC5-203ENST00000475540 ATP8B2P98198 1209 aa8.43□□□□□ -1.06
SMC5-203ENST00000475540 CDC42EP1Q00587 391 aa8.43□□□□□ -1.06
SMC5-203ENST00000475540 FAM102AQ5T9C2 384 aaPredicted RBP8.43□□□□□ -1.06
SMC5-203ENST00000475540 MYOCQ99972 504 aa8.43□□□□□ -1.06
SMC5-203ENST00000475540 ZNF768Q9H5H4 540 aaKnown RBP8.43□□□□□ -1.06
SMC5-203ENST00000475540 DDX56Q9NY93 547 aaKnown RBP8.43□□□□□ -1.06
SMC5-203ENST00000475540 FZD1Q9UP38 647 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms