RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 RBAKQ9NYW8 714 aaPredicted RBP10.56□□□□□ -0.72
USP39-214ENST00000474572 GTF3C4Q9UKN8 822 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 HPCAL4Q9UM19 191 aa10.56□□□□□ -0.72
USP39-214ENST00000474572 NOC2LQ9Y3T9 749 aaKnown RBP10.56□□□□□ -0.72
USP39-214ENST00000474572 GOLGB1Q14789 3259 aaKnown RBP10.55□□□□□ -0.72
USP39-214ENST00000474572 TMCO5BA8MYB1 307 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 MIF4GDA9UHW6 222 aaKnown RBP10.55□□□□□ -0.72
USP39-214ENST00000474572 HBP1O60381 514 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 TOM1L1O75674 476 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 DLATP10515 647 aaKnown RBP10.55□□□□□ -0.72
USP39-214ENST00000474572 UNGP13051 313 aaPredicted RBP10.55□□□□□ -0.72
USP39-214ENST00000474572 ABCB4P21439 1286 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 ACOT2P49753 483 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 POU5F1BQ06416 359 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 MCL1Q07820 350 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 ARHGAP1Q07960 439 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 GPS2Q13227 327 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 TTLL4Q14679 1199 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 CLEC16AQ2KHT3 1053 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 ZBTB41Q5SVQ8 909 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 DCAF12L1Q5VU92 463 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 ACAD10Q6JQN1 1059 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 TAPT1Q6NXT6 567 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 MAMDC4Q6UXC1 1216 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 EEPD1Q7L9B9 569 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 ANKRD23Q86SG2 305 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 IFNLR1Q8IU57 520 aaPredicted RBP10.55□□□□□ -0.72
USP39-214ENST00000474572 WDR49Q8IV35 697 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 ZBTB8OSQ8IWT0 167 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 DHX37Q8IY37 1157 aaKnown RBP10.55□□□□□ -0.72
USP39-214ENST00000474572 LINC01465Q8N7H1 131 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 PRPF31Q8WWY3 499 aaKnown RBP10.55□□□□□ -0.72
USP39-214ENST00000474572 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.55□□□□□ -0.72
USP39-214ENST00000474572 CD101Q93033 1021 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 EMID1Q96A84 441 aaPredicted RBP10.55□□□□□ -0.72
USP39-214ENST00000474572 FNBP1Q96RU3 617 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 ACO2Q99798 780 aaKnown RBP10.55□□□□□ -0.72
USP39-214ENST00000474572 MSTO1Q9BUK6 570 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 NFKBIZQ9BYH8 718 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 KATNBL1Q9H079 304 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 SMARCAD1Q9H4L7 1026 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 EFCC1Q9HA90 598 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 PDE11AQ9HCR9 933 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 VTA1Q9NP79 307 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 MED4Q9NPJ6 270 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 C1orf112Q9NSG2 853 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 UVRAGQ9P2Y5 699 aa10.55□□□□□ -0.72
USP39-214ENST00000474572 COL1A2P08123 1366 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 NOP56O00567 594 aaKnown RBP10.54□□□□□ -0.72
USP39-214ENST00000474572 OGTO15294 1046 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 ASAP2O43150 1006 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 RAD51CO43502 376 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 CEP104O60308 925 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 ZMYND10O75800 440 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 HEXIM1O94992 359 aaKnown RBP10.54□□□□□ -0.72
USP39-214ENST00000474572 CYP1A1P04798 512 aaPredicted RBP10.54□□□□□ -0.72
USP39-214ENST00000474572 PRKCBP05771 671 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 GLI1P08151 1106 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 TXNP10599 105 aaKnown RBP10.54□□□□□ -0.72
USP39-214ENST00000474572 TBXAS1P24557 533 aaPredicted RBP10.54□□□□□ -0.72
USP39-214ENST00000474572 CTNNA2P26232 953 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 PIK3CAP42336 1068 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 MATR3P43243 847 aaKnown RBP eCLIP10.54□□□□□ -0.72
USP39-214ENST00000474572 BPIFB4P59827 614 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 FKBP1BP68106 108 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 CCNA1P78396 465 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 POU5F1Q01860 360 aaKnown RBP10.54□□□□□ -0.72
USP39-214ENST00000474572 DMTNQ08495 405 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 LAMTOR4Q0VGL1 99 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 CUL2Q13617 745 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 SURF1Q15526 300 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 CLUL1Q15846 466 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 RALGAPA2Q2PPJ7 1873 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 WDR44Q5JSH3 913 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 ARMCX2Q7L311 632 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 TRIM50Q86XT4 487 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 IFT20Q8IY31 132 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 GSPT2Q8IYD1 628 aaKnown RBP10.54□□□□□ -0.72
USP39-214ENST00000474572 MREGQ8N565 214 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 GPRC5AQ8NFJ5 357 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 FAM71BQ8TC56 605 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 COPS5Q92905 334 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 SLC10A4Q96EP9 437 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 SPATA33Q96N06 139 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 KRT12Q99456 494 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 PI4K2AQ9BTU6 479 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 FZD8Q9H461 694 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 SLITRK6Q9H5Y7 841 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 APOBEC3GQ9HC16 384 aaKnown RBP10.54□□□□□ -0.72
USP39-214ENST00000474572 PTPRHQ9HD43 1115 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 AVENQ9NQS1 362 aaPredicted RBP10.54□□□□□ -0.72
USP39-214ENST00000474572 SEPT11Q9NVA2 429 aaKnown RBP10.54□□□□□ -0.72
USP39-214ENST00000474572 CPSF3Q9UKF6 684 aaKnown RBP10.54□□□□□ -0.72
USP39-214ENST00000474572 PCDHB2Q9Y5E7 798 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 ALG6Q9Y672 507 aa10.54□□□□□ -0.72
USP39-214ENST00000474572 TTLL13PA6NNM8 815 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 BTBD19C9JJ37 291 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 ACKR2O00590 384 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 C22orf31O95567 290 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 SYF2O95926 243 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms