RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 TRIM14Q14142 442 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 NR1I3Q14994 352 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 PLEKHG4Q58EX7 1191 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 WDR44Q5JSH3 913 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 MFSD5Q6N075 450 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 CNKSR3Q6P9H4 555 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 IRF2BP1Q8IU81 584 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 FMNL3Q8IVF7 1028 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 ABI1Q8IZP0 508 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 RNF169Q8NCN4 708 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 NEK11Q8NG66 645 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 URGCPQ8TCY9 931 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 PARD3BQ8TEW8 1205 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 FAM81BQ96LP2 452 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 CGRRF1Q99675 332 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 XPO4Q9C0E2 1151 aaKnown RBP11.21□□□□□ -0.61
COL12A1-206ENST00000474564 DNAI2Q9GZS0 605 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 MTIF3Q9H2K0 278 aaKnown RBP11.21□□□□□ -0.61
COL12A1-206ENST00000474564 IKZF4Q9H2S9 585 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 MMRN2Q9H8L6 949 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 AGO3Q9H9G7 860 aaKnown RBP11.21□□□□□ -0.61
COL12A1-206ENST00000474564 TMEM8AQ9HCN3 771 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.61
COL12A1-206ENST00000474564 RGS18Q9NS28 235 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 SNTG2Q9NY99 539 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 KANSL3Q9P2N6 904 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 GIT1Q9Y2X7 761 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 IPPQ9Y573 584 aa11.21□□□□□ -0.61
COL12A1-206ENST00000474564 ABHD14A-ACY1A0A1B0GW23 586 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 A0A1W2PQC6 194 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 TTLL13PA6NNM8 815 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 IBSPP21815 317 aaPredicted RBP11.2□□□□□ -0.62
COL12A1-206ENST00000474564 MSNP26038 577 aaKnown RBP11.2□□□□□ -0.62
COL12A1-206ENST00000474564 CDC25BP30305 580 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 FMO5P49326 533 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 MXI1P50539 228 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 TMEM132DQ14C87 1099 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 EXOC3L4Q17RC7 722 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 GLB1LQ6UWU2 654 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 DEFB128Q7Z7B8 93 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 DBF4BQ8NFT6 615 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 BEST2Q8NFU1 509 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 SLC35C1Q96A29 364 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 EIF2AQ9BY44 585 aaKnown RBP11.2□□□□□ -0.62
COL12A1-206ENST00000474564 ELAC1Q9H777 363 aaKnown RBP11.2□□□□□ -0.62
COL12A1-206ENST00000474564 PDE11AQ9HCR9 933 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 C2CD2Q9Y426 696 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 DAAM1Q9Y4D1 1078 aa11.2□□□□□ -0.62
COL12A1-206ENST00000474564 LACTBL1A8MY62 500 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 ABLIM1O14639 778 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 CXCL10P02778 98 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 AMHP03971 560 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 EDN1P05305 212 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 ADRB2P07550 413 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 CXCL8P10145 99 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 P4HA1P13674 534 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 ATF7P17544 494 aaPredicted RBP11.19□□□□□ -0.62
COL12A1-206ENST00000474564 TRIM21P19474 475 aaKnown RBP11.19□□□□□ -0.62
COL12A1-206ENST00000474564 KCNJ6P48051 423 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 GCLMP48507 274 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 MYO1EQ12965 1108 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 DSC3Q14574 896 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 ENOX2Q16206 610 aaKnown RBP11.19□□□□□ -0.62
COL12A1-206ENST00000474564 SEZ6Q53EL9 994 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 COL13A1Q5TAT6 717 aaPredicted RBP11.19□□□□□ -0.62
COL12A1-206ENST00000474564 SPECC1LQ69YQ0 1117 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 CRELD2Q6UXH1 353 aaPredicted RBP11.19□□□□□ -0.62
COL12A1-206ENST00000474564 CACNA2D4Q7Z3S7 1137 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 TMC6Q7Z403 805 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 MRPL10Q7Z7H8 261 aaKnown RBP11.19□□□□□ -0.62
COL12A1-206ENST00000474564 C7orf61Q8IZ16 206 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 FBXL13Q8NEE6 735 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 KIF12Q96FN5 646 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 BORCS6Q96GS4 357 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 SCLYQ96I15 445 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 FAM193BQ96PV7 902 aaPredicted RBP11.19□□□□□ -0.62
COL12A1-206ENST00000474564 HSD3B7Q9H2F3 369 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 TSPYL2Q9H2G4 693 aaPredicted RBP11.19□□□□□ -0.62
COL12A1-206ENST00000474564 RSAD1Q9HA92 442 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 IMPACTQ9P2X3 320 aa11.19□□□□□ -0.62
COL12A1-206ENST00000474564 UBQLN1Q9UMX0 589 aaKnown RBP11.19□□□□□ -0.62
COL12A1-206ENST00000474564 TTC26A0AVF1 554 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 ENPP3O14638 875 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 PMM2O15305 246 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 NBNO60934 754 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 ZC3H11AO75152 810 aaKnown RBP eCLIP11.18□□□□□ -0.62
COL12A1-206ENST00000474564 RECQL4O94761 1208 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 BAIAP3O94812 1187 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 THP07101 528 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 KRT19P08727 400 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 CCDC172P0C7W6 258 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 TRIM49P0CI25 452 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 TRIM49CP0CI26 452 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 AKAP5P24588 427 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 TNFSF9P41273 254 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 PIK3CAP42336 1068 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 RBP5P82980 135 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 FPGSQ05932 587 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 SGSM1Q2NKQ1 1148 aa11.18□□□□□ -0.62
COL12A1-206ENST00000474564 SLC10A6Q3KNW5 377 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms