RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 PACSIN1Q9BY11 444 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 PITPNM3Q9BZ71 974 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 MIS12Q9H081 205 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 NEUROG2Q9H2A3 272 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 TUFT1Q9NNX1 390 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 ZNF277Q9NRM2 450 aaPredicted RBP8.57□□□□□ -1.04
CCDC93-208ENST00000474546 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.57□□□□□ -1.04
CCDC93-208ENST00000474546 NDUFA13Q9P0J0 144 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 DNAJB4Q9UDY4 337 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 LNPEPQ9UIQ6 1025 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 PACSIN2Q9UNF0 486 aaPredicted RBP8.57□□□□□ -1.04
CCDC93-208ENST00000474546 KIAA1024Q9UPX6 916 aa8.57□□□□□ -1.04
CCDC93-208ENST00000474546 TCP11X1B4DZS4 312 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 ZBTB5O15062 677 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 ECE2O60344 883 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 NMT2O60551 498 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 EXOC3O60645 756 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 CCDC22O60826 627 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 ATP2C2O75185 946 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 ZPR1O75312 459 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 VHLP40337 213 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 PTGIRP43119 386 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 FMO5P49326 533 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 CDK8P49336 464 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 SLC12A3P55017 1021 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 RNASE9P60153 205 aaKnown RBP8.56□□□□□ -1.04
CCDC93-208ENST00000474546 RPL26P61254 145 aaKnown RBP8.56□□□□□ -1.04
CCDC93-208ENST00000474546 MXRA7P84157 204 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 OCRLQ01968 901 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 TBCCQ15814 346 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 SLC45A4Q5BKX6 768 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 DCAF17Q5H9S7 520 aaPredicted RBP8.56□□□□□ -1.04
CCDC93-208ENST00000474546 ZDHHC24Q6UX98 284 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 DDX42Q86XP3 938 aaKnown RBP eCLIP8.56□□□□□ -1.04
CCDC93-208ENST00000474546 SLC13A5Q86YT5 568 aaPredicted RBP8.56□□□□□ -1.04
CCDC93-208ENST00000474546 RTKN2Q8IZC4 609 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 MIPOL1Q8TD10 442 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 LRRC15Q8TF66 581 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 THOC1Q96FV9 657 aaKnown RBP8.56□□□□□ -1.04
CCDC93-208ENST00000474546 CEP95Q96GE4 821 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 OLFM3Q96PB7 478 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 FRMD8P1Q9BZ68 369 aaPredicted RBP8.56□□□□□ -1.04
CCDC93-208ENST00000474546 CCDC113Q9H0I3 377 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 ADAM7Q9H2U9 754 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 TLE6Q9H808 572 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 TMEM206Q9H813 350 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 PSTPIP2Q9H939 334 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 ETNK1Q9HBU6 452 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 FGFR1OP2Q9NVK5 253 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 GRHL1Q9NZI5 618 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 BIN2Q9UBW5 565 aaPredicted RBP8.56□□□□□ -1.04
CCDC93-208ENST00000474546 PCDHA3Q9Y5H8 950 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 SLC4A7Q9Y6M7 1214 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 ZHX2Q9Y6X8 837 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 DDX60LQ5H9U9 1706 aaKnown RBP8.56□□□□□ -1.04
CCDC93-208ENST00000474546 UNC79Q9P2D8 2635 aa8.56□□□□□ -1.04
CCDC93-208ENST00000474546 ANKRD31Q8N7Z5 1873 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 ZDBF2Q9HCK1 2354 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 GPR75-ASB3A0A0A6YYF3 556 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 A0A1W2PRG0 241 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 POTEMA6NI47 508 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 IPO5O00410 1097 aaKnown RBP8.55□□□□□ -1.04
CCDC93-208ENST00000474546 FSCN2O14926 492 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 RAD21O60216 631 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 ZBED4O75132 1171 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 SMIM24O75264 130 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 FAM13AO94988 1023 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 ITGA4P13612 1032 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 BRAFP15056 766 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 ATF2P15336 505 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 MARK3P27448 753 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 PTPN4P29074 926 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 PHBP35232 272 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 CRKLP46109 303 aaKnown RBP8.55□□□□□ -1.04
CCDC93-208ENST00000474546 MYL7Q01449 175 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 ATP2B2Q01814 1243 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 CDK18Q07002 472 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 GIT2Q14161 759 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 RRP1BQ14684 758 aaKnown RBP8.55□□□□□ -1.04
CCDC93-208ENST00000474546 ENOX2Q16206 610 aaKnown RBP8.55□□□□□ -1.04
CCDC93-208ENST00000474546 MUM1Q2TAK8 710 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 ZNF568Q3ZCX4 644 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 RBM26Q5T8P6 1007 aaKnown RBP8.55□□□□□ -1.04
CCDC93-208ENST00000474546 DAB2IPQ5VWQ8 1189 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 STYK1Q6J9G0 422 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 CCDC174Q6PII3 467 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 TMC4Q7Z404 712 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 PHLDB2Q86SQ0 1253 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 EXOC3L1Q86VI1 746 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 RASAL3Q86YV0 1011 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 EGFL6Q8IUX8 553 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 TRIM42Q8IWZ5 723 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 NELFCDQ8IXH7 590 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 C12orf56Q8IXR9 622 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 ATL2Q8NHH9 583 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 DCAF4Q8WV16 495 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 DNAJC9Q8WXX5 260 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 STMN2Q93045 179 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 RNF25Q96BH1 459 aaPredicted RBP8.55□□□□□ -1.04
CCDC93-208ENST00000474546 EEF2KMTQ96G04 330 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms