RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PF4V1P10720 104 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 CYP2A6P11509 494 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 GAP43P17677 238 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 ATP5JP18859 108 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 ABCG1P45844 678 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 HAAOP46952 286 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 ALDH3A2P51648 485 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 NRLP54845 237 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 SLC26A5P58743 744 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 STRN3Q13033 797 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 FKBP5Q13451 457 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 GTF2H3Q13889 308 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 FRG1Q14331 258 aaKnown RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 MXD4Q14582 209 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 AGERQ15109 404 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 NEK5Q6P3R8 708 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 KLC3Q6P597 504 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 CEP57Q86XR8 500 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 SYTL1Q8IYJ3 562 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 SCYL3Q8IZE3 742 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 AVL9Q8NBF6 648 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 ZSWIM2Q8NEG5 633 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 GOT1L1Q8NHS2 421 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 TCP11Q8WWU5 503 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 SLC35B4Q969S0 331 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 MIEF2Q96C03 454 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 SDCCAG3Q96C92 435 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 ZNF845Q96IR2 970 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 MAML3Q96JK9 1138 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 FAM167AQ96KS9 214 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 CCDC138Q96M89 665 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 NECAB3Q96P71 396 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 PSKH2Q96QS6 385 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 CORO1BQ9BR76 489 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 ARHGAP9Q9BRR9 750 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 TARS2Q9BW92 718 aaKnown RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 NIF3L1Q9GZT8 377 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 RSAD1Q9HA92 442 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 RALYQ9UKM9 306 aaKnown RBP6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 LIMCH1Q9UPQ0 1083 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 GIT1Q9Y2X7 761 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 TRANK1O15050 2925 aa6.56□□□□□ -1.36
SMARCE1-208ENST00000474246 COL15A1P39059 1388 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 MYO3BQ8WXR4 1341 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 RSPH10B2B2RC85 870 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 MAPK13O15264 365 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 SRGAP2O75044 1071 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 ENDOD1O94919 500 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 TRIM16O95361 564 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 RSPH10BP0C881 870 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 EPB41P11171 864 aaKnown RBP6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 ZFXP17010 805 aaPredicted RBP6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 DNAJB1P25685 340 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 MAPK3P27361 379 aaPredicted RBP6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 MCM4P33991 863 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 MAGEA10P43363 369 aaPredicted RBP6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 VPS41P49754 854 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 GSK3AP49840 483 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 B2MP61769 119 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 DCAF7P61962 342 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 MRPS15P82914 257 aaKnown RBP6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 CAP1Q01518 475 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 ADAM15Q13444 863 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 NAA30Q147X3 362 aaPredicted RBP6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 NAA25Q14CX7 972 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 C8orf34Q49A92 452 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 MEI1Q5TIA1 1274 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 WDR73Q6P4I2 378 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 XKR5Q6UX68 686 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 SH3BP5LQ7L8J4 393 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 SPC24Q8NBT2 197 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 ZBTB44Q8NCP5 570 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 DENND6BQ8NEG7 585 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 ADAM32Q8TC27 787 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 RNF139Q8WU17 664 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 PIBF1Q8WXW3 757 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 OSBP2Q969R2 916 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 TCF25Q9BQ70 676 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 RIOK1Q9BRS2 568 aaKnown RBP6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 SPZ1Q9BXG8 430 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 GLIS2Q9BZE0 524 aaPredicted RBP6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 MMRN2Q9H8L6 949 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 TCF7L1Q9HCS4 588 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 HPS4Q9NQG7 708 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 RRP7BPQ9NSQ0 103 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 NDFIP2Q9NV92 336 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 MALT1Q9UDY8 824 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 LRCH1Q9Y2L9 728 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 PCDHB9Q9Y5E1 797 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 PCDHGB5Q9Y5G0 923 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 ANKRD11Q6UB99 2663 aaPredicted RBP6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 FAM205AQ6ZU69 1335 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 TTC21BQ7Z4L5 1316 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 LRRC14BA6NHZ5 514 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 POLR2DO15514 142 aaKnown RBP6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 SPOPO43791 374 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 NEBLO76041 1014 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 FARP2O94887 1054 aaPredicted RBP6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 FBXO21O94952 628 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 SLITRK5O94991 958 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms