RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 ZNF572Q7Z3I7 529 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 GLCCI1Q86VQ1 547 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 SGMS1Q86VZ5 419 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 CMTR2Q8IYT2 770 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 PQLC1Q8N2U9 271 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 CPA6Q8N4T0 437 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 MDGA1Q8NFP4 955 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 HOXB13Q92826 284 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 HSPBAP1Q96EW2 488 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 TMEM176AQ96HP8 235 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 SENP6Q9GZR1 1112 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 MAN1C1Q9NR34 630 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 TCEAL9Q9UHQ7 104 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 ANKRD6Q9Y2G4 727 aa4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 LUC7L2Q9Y383 392 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-213ENST00000474240 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 PRR5-ARHGAP8B1AHC4 643 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 ADCY6O43306 1168 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 PCDHGA12O60330 932 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 RAMP2O60895 175 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 ARIH2O95376 493 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 MAKP20794 623 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 MAN2A2P49641 1150 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 CDC42EP1Q00587 391 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 KIF23Q02241 960 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 PPP3CAQ08209 521 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 RAB39AQ14964 217 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 Q6ZSN1 163 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 HTR3DQ70Z44 454 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 TTC7BQ86TV6 843 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 DRC7Q8IY82 874 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 TRMT2AQ8IZ69 625 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 ZFP28Q8NHY6 868 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 TDP1Q9NUW8 608 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 FAM30AQ9NZY2 134 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 SH3BP1Q9Y3L3 701 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 PCDHGA9Q9Y5G4 932 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 PCDHGA8Q9Y5G5 932 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 PCDHGA7Q9Y5G6 932 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 PCDHGA6Q9Y5G7 932 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 PCDHGA3Q9Y5H0 932 aa4.31□□□□□ -1.72
ECHDC1-213ENST00000474240 KRTAP29-1A8MX34 341 aaPredicted RBP4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 DIRC3C9JPN6 131 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 SLC16A6O15403 523 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 GPR32O75388 356 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 RFPL1O75677 317 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 ABLIM3O94929 683 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 IL33O95760 270 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 ALAS1P13196 640 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 BMP5P22003 454 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 ADSLP30566 484 aaPredicted RBP4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 HIBADHP31937 336 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 GUCY1A2P33402 732 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 PTPN7P35236 360 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 SREBF1P36956 1147 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 MCL1Q07820 350 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 CRHR2Q13324 411 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 CNGB1Q14028 1251 aaPredicted RBP4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 CCDC142Q17RM4 750 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 UAP1L1Q3KQV9 507 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 PRAMEF14Q5SWL7 426 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 OTUD7BQ6GQQ9 843 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 Q6ZVL8 140 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 NRG4Q8WWG1 115 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 COA7Q96BR5 231 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 CLIP3Q96DZ5 547 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 HOOK2Q96ED9 719 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 CPPED1Q9BRF8 314 aaPredicted RBP4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 DMRT3Q9NQL9 472 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 TUBD1Q9UJT1 453 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 INTUQ9ULD6 942 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 POLHQ9Y253 713 aa4.3□□□□□ -1.72
ECHDC1-213ENST00000474240 TRIM24O15164 1050 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 RECQL4O94761 1208 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 PEX11BO96011 259 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 ALOX15P16050 662 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 FBLP22087 321 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 CYP2C19P33261 490 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 CLRN1P58418 232 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 COL10A1Q03692 680 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 CXorf57Q6NSI4 855 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 EFCAB12Q6NXP0 572 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 RSPH3Q86UC2 560 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 ZNF808Q8N4W9 903 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 LILRA3Q8N6C8 439 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 PPM1NQ8N819 430 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 NLGN4YQ8NFZ3 816 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 OR52N2Q8NGI0 321 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 MDM1Q8TC05 714 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 ATXN2LQ8WWM7 1075 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 AIFM3Q96NN9 605 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 SLC2A13Q96QE2 648 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 DCLRE1CQ96SD1 692 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 TTPALQ9BTX7 342 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 GPR87Q9BY21 358 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 REXO4Q9GZR2 422 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 CDH19Q9H159 772 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 CALCOCO1Q9P1Z2 691 aa4.29□□□□□ -1.72
ECHDC1-213ENST00000474240 ZNF180Q9UJW8 692 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms