RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 TRIM59Q8IWR1 403 aa13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 ANKRD20A12PQ8NF67 263 aa13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 CCDC127Q96BQ5 260 aa13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 PGBD4Q96DM1 585 aa13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 FAM212AQ96EL1 285 aa13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 BORCS6Q96GS4 357 aa13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 SNX27Q96L92 541 aa13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 TOPORSQ9NS56 1045 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC12-217ENST00000473348 TTC26A0AVF1 554 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 BAIAP3O94812 1187 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 TRIM49P0CI25 452 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 TRIM49CP0CI26 452 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 VAMP7P51809 220 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 EPHB4P54760 987 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 FAM189BP81408 668 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 KRT31Q15323 416 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 MAN2A1Q16706 1144 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 SLC10A6Q3KNW5 377 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 TCERG1LQ5VWI1 586 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 AGMOQ6ZNB7 445 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 ZNF365Q70YC5 407 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 C16orf59Q7L2K0 433 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 USP37Q86T82 979 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 PLEKHO2Q8TD55 490 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 TMC2Q8TDI7 906 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 PARD3BQ8TEW8 1205 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 FNBP1Q96RU3 617 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 ELAC1Q9H777 363 aaKnown RBP13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 RSAD1Q9HA92 442 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 PDE11AQ9HCR9 933 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 TMEM161AQ9NX61 479 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 TAB2Q9NYJ8 693 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 KLK14Q9P0G3 267 aa13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 LIMA1Q9UHB6 759 aaKnown RBP13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 TNRC18O15417 2968 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC12-217ENST00000473348 LACTBL1A8MY62 500 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 EOMESO95936 686 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 FGBP02675 491 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 DLATP10515 647 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 PRKCSHP14314 528 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 MLH1P40692 756 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 WDR5P61964 334 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 DLG4P78352 724 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 ENPEPQ07075 957 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 SURF1Q15526 300 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 TMEM240Q5SV17 173 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 OTOP2Q7RTS6 562 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 NPAS4Q8IUM7 802 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 SLC35C1Q96A29 364 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 ZFP42Q96MM3 310 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 RPS6KC1Q96S38 1066 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 CGRRF1Q99675 332 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.61□□□□□ -0.231e-7■■□□□ 13.8
TRAPPC12-217ENST00000473348 TUBGCP2Q9BSJ2 902 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 CXCL16Q9H2A7 254 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 PLEKHA5Q9HAU0 1116 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 UBN1Q9NPG3 1134 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 RNF216Q9NWF9 866 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 LRFN2Q9ULH4 789 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 GIT1Q9Y2X7 761 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 PCDHB7Q9Y5E2 793 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 PTPRJQ12913 1337 aa13.61□□□□□ -0.23
TRAPPC12-217ENST00000473348 TSC2P49815 1807 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 GOLGA6L3A6NEY3 463 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 LRRIQ3A6PVS8 624 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 ZBBXA8MT70 800 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 CAPN15O75808 1086 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 AMHP03971 560 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 TPM2P07951 284 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 NFICP08651 508 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 TNNI1P19237 187 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 MAGEA10P43363 369 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 KCNJ6P48051 423 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 COPB1P53618 953 aaKnown RBP13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 DEFB103AP81534 67 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 TMEM132DQ14C87 1099 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 GLRA4Q5JXX5 417 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 C1orf220Q5T0J3 134 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 LMBRD2Q68DH5 695 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 APTXQ7Z2E3 356 aaKnown RBP13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 WDR49Q8IV35 697 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 CD302Q8IX05 232 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 EFCAB13Q8IY85 973 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 HELQQ8TDG4 1101 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 FAM84AQ96KN4 292 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 GAD1Q99259 594 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 POP1Q99575 1024 aaKnown RBP13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 ASB7Q9H672 318 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 MMRN2Q9H8L6 949 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 RNF19AQ9NV58 838 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 CNTN3Q9P232 1028 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 INPP5FQ9Y2H2 1132 aa13.6□□□□□ -0.23
TRAPPC12-217ENST00000473348 FSD2A1L4K1 749 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 ARL5CA6NH57 179 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 PES1O00541 588 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 PTGESO14684 152 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 STX10O60499 249 aa13.59□□□□□ -0.23
TRAPPC12-217ENST00000473348 UPP2O95045 317 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms